LOC118942984 (LOC106592811)


Basic Information

Item Value
gene id LOC118942984
gene name LOC106592811
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 64776566 ~ 64790358 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036958443.1
TCTTCAAATGAGACCATAAAGGGTTATATCTTCTGACAGACAGCAACCCGAGACTGACCAACACAACCACAGACCTCCAACCGTGTTCCCACAGTATGGTCATGTCTGGTCTGACCAGGTCCAGCAGTGTACACAACGATCACAGCGGTCACAACCTGTCCTCAACCACAACCACGCACGGTCACCACCCCGATCAGAGCGGTGCGGTCGCCGTGGGCGGTTGTGGTCTCACTCCGGTCCTGGACTATACGGCTGAGATGGAGCGCTACCAATCCTTCGCTAACTTCTACACTAAAACCAACGTGAATATGAACGCAGTTAACAGCATGAACTTCCCTCAGTCGGCCAAGCTCGCCCACATCACCGCTCCTATGTTCCCCGGCGGCAGGCTCGGAGTGGGCGTGGCGGGCGTGACGCCGTGGGGTTGTCATGACAACATCAACATGAATATGAACGTCAACGCGGCGATGCTTTGGGGGCGGAAACCTCCCGTGCATCAGACCACGCCCCTAGCGCCGCCCACAACACACCCGTCGCCCTCGACAACGCACATGCAGCCCCACCGGACCGGCGCCGTGGCGGGCGGTCAGGGTGGAGAGGGCAAGCAGCACGCAAGACATGGAGGACACGCCTCCTCACAGGGACAGGAAATGCATCATCATCACGGGAATAACAACTTCCAGTCCGGCTATGCTGCCGCCAATCACATGACCAAACAGGGCCATGCCCACCAGGACATGCTCAGCCTATCGAATCGCAGCAGCAGTGGCAACGGAGGAGGAGGCGGAGTCAACGGGGTCAACATGTCCAACTTCCCCGCCGGAATGCTGGGGTTACCACCCGGAGTCATCGTCATGGCGATGGGGTCGCACAATAACATTTCGGACTCCTCCCACTTCCAGATGACGACCAATCATAACCAACTTCTGTCGGACTGCCACCATGTCAACCAGACAAACCCCTCACCCTGCTCTTCAACCTCGCCGGGGATGACCTctgggggtcaggggtcaggagcCTCCAAGAGGAAGAGGAAGCGGTGTGGAGTGTGTGCCCCCTGCAGAAGACTGATTAACTGTGGGGTGTGTTCAGCCTGTAGAAACAGGAAGACAGGTCATCAGATCTGTAAGTTCAGGAAGTGTGACGAACTGAAGAAGAAGGCTGGGAGTATACAGCtagagAGTCCTCCCTCAGTGCCCAGTGGAGAAGCTTTCAGATGGTTCTTCTAGATGTCAGACCACAACCTCACTCCAAATGTGACCACAACCTCACTCCAAATGTGACCACAATCTCACTCCAAATGTGACCACAACCTCACTCCAAATGTGACCACAACCTCATTCCAAATGTGACCACAACCTCACTCCAAATGTGACCACAACCTCACTCCAATGTGACCACAACCTCACTCCAATGTGACCACAACCTCACTCCAATGTGACCACAACCTCACTCCAATGTGACCACAACCTCACTCCAATGTGACCACAACCTCACTCCAATGTGACCACAACTTAATCTCAACATGACCACATTGGCACTTCTTCCCTTCctcactcagacagacagagctctTATACCTCCAAACCCATACCCAACTTGGAAACTTTACAGTCAGTGGTCTAACCACGGTTGAATAGTGTGATCTAACCACGGTTGAATAGTGTGGTCTAACCACAGTTGAATAGTGTGATCTAACCACGGTTGAATAGTGTGGTCTAACCACGGTTGAATAGTGTGATCTAACCACGATCTCCCAACTCCACTGATCATGATCCTTTcctactactaccatactacagTGGACTACACTACTAGTATACTAGTGGACTACAGTACTACTGCTATACTACAGTGGAATATACTACTAGTATACTAG

Function

NR:

description
PREDICTED: mucin-19-like isoform X14

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036958443.1 True 1879 mRNA 0.53 2 64776566 64790358

Neighbor

gene id symbol gene type direction distance location
LOC118942818 LOC106608414 coding downstream 52782 64663711 ~ 64723784 (-)
LOC110509409 LOC106593257 coding downstream 128761 64590607 ~ 64647805 (-)
LOC118942817 LOC106608410 coding downstream 243196 64525897 ~ 64533370 (-)
cnga1b cnga1 coding downstream 258528 64483522 ~ 64518038 (-)
nfxl1 nfxl1 coding downstream 295579 64384916 ~ 64480987 (-)
LOC118942819 LOC106595717 coding upstream 133131 64923489 ~ 64930766 (-)
G1762094 NA non-coding downstream 739 64775019 ~ 64775827 (-)
G1762092 NA non-coding downstream 2815 64772864 ~ 64773751 (-)
G1762091 NA non-coding downstream 3997 64772255 ~ 64772569 (-)
G1762093 NA non-coding downstream 4901 64767530 ~ 64771665 (-)
G1762099 NA non-coding upstream 1779 64792137 ~ 64792374 (-)
G1762100 NA non-coding upstream 2911 64793269 ~ 64793545 (-)
G1762101 NA non-coding upstream 3392 64793750 ~ 64794139 (-)
G1762106 NA non-coding upstream 37258 64827616 ~ 64829643 (-)
G1762118 NA non-coding upstream 52696 64843054 ~ 64843669 (-)
G1762085 NA other downstream 22067 64753707 ~ 64754499 (-)
G1762080 NA other downstream 27292 64748504 ~ 64749274 (-)
G1761826 NA other downstream 358514 64417310 ~ 64418052 (-)
LOC110517683 LOC106592125 other downstream 553078 64205352 ~ 64223639 (-)
G1762162 NA other upstream 66150 64856508 ~ 64857185 (-)

Expression


Co-expression Network