LOC118942819 (LOC106595717)


Basic Information

Item Value
gene id LOC118942819
gene name LOC106595717
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 64923489 ~ 64930766 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036956541.1
GTACAGTGTCTCTGGCTTTGTTCCGAACTCTCATTGGTCTGTTCTGTGAAGACGTCATGCTTCAGCTCATACTCAggtatCTGATCCCGTGTACAcacctgtgtgtgagagaacgcCGCTCTCTGAAGGACAGAGACGCCTACTCTTCATCAGCTGTTAAATtcctcttcctcactccctcCTGGTGCCCCCTGCGCCTCGGAGCCGTACACACTCACACCCAACACATCCACTGGGCCATGGGGaatgACGTTCCCATGTCAGAGGGTGACAGTGTTGGTTACTCCAGGATCTGCAGGACAGACCTCCTGATGAATGTCAACTATCTCCAGTACCTCTGGGATGCTAGAGTTGGGATCGCTGCATCGCTCCAggcctgtctggtctggtctggtccctATGACGGGGAGAAGCCTGCAGCTCGAGAGGAGGAAgacggggaagaagagagagagcaagagatagaggaggagaagacgGATCAAACCTTCAACTGGACTTCATCTCCCagccctcccctcacctccccccCTGTAACCATGGGAAACCAACATAgagggggagacggagggagggggagtgTGGTCGAGTTGGAGTGGGATGATAGTTATGAGTGGGATGATAgtgccctcccctcctcctccctcccgctCACCCCCCCAGTACATATTGAAACCCCTCAGCATATTCAGGAGATGAGACGTTCGGCCATAATGTTGATCCAAGGCTCCTACGTAGAGGAGTCGGACTTTCAGGACGATGTGTTGGTCTATAACCTCATAgcacagaaagacgaggtggaaTACAAGCCTGACCGCAGGACTACTCCACAGACCAGGAAACCAGTTGTTAGTCAAACAACCTCGCTCGTTCACAGACATGGAACGCTTAgacgagagaaggagagggtgatcgtggaagaggaggtgagagaggaagagggggtgagagaggaagaggggatgagagagaaagaggaggtgatCGTggaagaggggggggtgagagaggaagagggggtgagagaggaagagggggtgaTCGTGGAAGAGGGGCTGATCGTggaagagggggtgagagaggaagagggggtgagagaggagaagcgatcacaaccacagctgctcagTAACGGTCTGAGCTGTGAGGACCACACAGTCAATGAGGAGGTAGACGATGACCGTAAACGCAAGTCGTCTGGACCGCATTTGGACCACAACTGCAACAGGACGGTGACCACGACCGTGAATCAGACGAATGACCTGACAACAGCAGACCACCAGGAGAGAACCACCTCAGAGAACCACACGCACCCAGTCGAGAAACAGCAGGCCTGTAACAAAACCGATGCTGATCATCCTGTGAGCCCGGTTACGACCTCGGCGGTGGATGACAGCTTCCTGTCCCAGTATCGGGAGCTCATGCGCTCGCTGGGGGTGGAGCCTGATGACGTCACCGATGACATCACAGAGTTCAGGAAGCGTGTGTTGGCTCTGgcccagggaggagaggaggaggaggtggacttTAGCGTGTTCTCTACAGACTCCCCGGAACCGAAGGATGCCGATCTGGAACCGGAGAACAGTCCAGAACTGACGAGCAACAGCCAAGACAGAAAACATGGGATACCCTTCACTGGCCCGTTCATTAGTGTTCTGCTGTCACGGTTGGAGAACCTGTTGGAGAACCCTATTCCAGTCAACCTGCTAGTTACAGGGATCCTGTCTCAGCTCGCCAAATACCCCCAGCCTCTCCTCCGGGCGTTcctactgaacacacacactgacccaccgCCCAACGTACACACACTATACCAGgtgctggTCTCTGTGCGTGTGCAGATAGAGCAGTACGCAACGGACCAGACAGAGTTTCCTGCTACAGTCAGAGAAGCATGGAGATACCTACTGGCTAGAGACCAAGCACTGAAACTCAGAGagCTCCTCGAGGACAGCCATAGTGATAACAGGAAGAGTGTTCTACCCAATGGAACACAGCATATAACGCAGAACGTCCCCCCGTGTCCCAACATTCCTCCGCAGGCCAGGAACAGAGTCTTCGCTACGGTTCTATATGCAGAGTTCTTAAAGGAGTTAGCTGCCATCGCACAGGAACACTCTATAGTACCTGACTCACTTCTAGAGGagattaacacacctgactcaccTGTAGAGGAATagattaacacacctgactcaccTATAGAGGAATagattaacacacctgactcacaTATAGAGGATATTAACACACCGACTCACCTATAGAGGAGGagattaacacacctgactcaccTATAGAGGAGGagattaacacacctgactcacaTATAGAGGAATagattaacacacctgactcacaTATAGAGGATATTAACACACCGACACACATAGAGGAGGagattaacacacctgactcaccTATAGAGGAGGagattaacacacctgactcaccTATAGAGGAATagattaacacacctgactcacaTATAGAGGAGATTGACAGACCTGACTCACCTATAGAGGagattaacacacctgactcaccTATAGAGGagattaacacacctgactcaccTATAGAGGACTagattaacacacctgactcacaTATAGAGGAATAGATTAACACACCCGACTCACCTATAGAAGAGATTAGCACACCTGACTCACCTATAGAGGAATagattaacacacctgactcaccTATAGAGGACTagattaacacacctgactcacaTATAGAGGAATAGATTAACAGACCTGACTCACCTATAGAGGAATagattaacacacctgactcaccTATAGAGGagattaacacacctgactcaccTATAGAGGAAGagattaacacacctgactcacaTATAGAGGagattaacacacctgactcaccTATAGAGGAATagattaacacacctgactcaccCATAGAGGACTagattaacacacctgattctcaTATAGAGGAGATTAACGCACCTGACTCACCTATAGAGGagattaacacacctgactcaccTATAGAGGACTagattaacacacctgactcacaTATAGAGGAGGagattaacacacctgactcaccTATAGAGGAGGagattaacac

Function

NR:

description
PREDICTED: protein FAM160A1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036956541.1 True 3114 mRNA 0.51 7 64923489 64930766

Neighbor

gene id symbol gene type direction distance location
LOC118942984 LOC106592811 coding downstream 133131 64776566 ~ 64790358 (-)
LOC118942818 LOC106608414 coding downstream 199705 64663711 ~ 64723784 (-)
LOC110509409 LOC106593257 coding downstream 275684 64590607 ~ 64647805 (-)
LOC118942817 LOC106608410 coding downstream 390119 64525897 ~ 64533370 (-)
cnga1b cnga1 coding downstream 405451 64483522 ~ 64518038 (-)
G1762187 NA non-coding downstream 6897 64915748 ~ 64916592 (-)
G1762186 NA non-coding downstream 7787 64915404 ~ 64915702 (-)
G1762183 NA non-coding downstream 9049 64910023 ~ 64914440 (-)
G1762182 NA non-coding downstream 20265 64902881 ~ 64903224 (-)
G1762181 NA non-coding downstream 20744 64902453 ~ 64902745 (-)
G1762162 NA other downstream 66304 64856508 ~ 64857185 (-)
G1762085 NA other downstream 168990 64753707 ~ 64754499 (-)
G1762080 NA other downstream 174215 64748504 ~ 64749274 (-)
G1761826 NA other downstream 505437 64417310 ~ 64418052 (-)

Expression


Co-expression Network