G1699289


Basic Information

Item Value
gene id G1699289
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 62852 ~ 63162 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1944372
TGTTAGAGGTTGTGTTGTTAAAGGTTGTGTTGTTACAGGTTGTGTTGTTAGAGGTTGTGTTGTTAGAGGTTGTGTTGTTAGAGGTTGTGTTGTTAGAGGCTGTGTTAGAGGTTGTGTTGTTAGAGGTTGTGTTGTTACAGGTTGTGTTGTTAGAGGTTGTGTTGTTACAGGTTGTGTTGTTAGAGGTTGTGTTGTTAGAGGTTGTGTTGTTAGAGGTTGTGTTGTTAGAGGCTGTGTTAGAGGTTGAGTTGTGAATGAACTGCCTGC
>TU1944373
TGTTAGAGGTTGTGTTGTTAAAGGTTGTGTTGTTACAGGTTGTGTTGTTAGAGGTTGTGTTGTTAGAGGTTGTGTTGTTAGAGGTTGTGTTGTTAGAGGTTGTGTTGTTACAGGTTGTGTTGTTAGAGGTTGTGTTGTTACAGGTTGTGTTGTTAGAGGTTGTGTTGTTAGAGGCTGTGTTAGAGGTTGAGTTGTGAATGAACTGCCTGC
>TU1944374
TGTTAGAGGTTGTGTTGTTAAAGGTTGTGTTGTTACAGGTTGTGTTGTTAGAGGTTGTGTTGTTAGAGGTTGTGTTGTTAGAGGTTGTGTTGTTAGAGGCTGTGTTAGAGGTTGTGTTGTTAGAGGTTGTGTTGTTACAGGTTGTGTTGTTAGAGGTTGTGTTGTTACAGGTTGTGTTGTTAGAGGTTGTGTTGTTAGAGGTTGTGTTGTTAGAGGTTGTGTTGTTAGAGGTTGTGTTGTTAGAGGCTGTGTTAGAGGTTGAGTTGTGAATGAACTGCCTGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1944372 False 267 lncRNA 0.41 2 62852 63162
TU1944373 False 210 lncRNA 0.41 3 62852 63162
TU1944374 True 282 lncRNA 0.41 2 62852 63162

Neighbor

gene id symbol gene type direction distance location
LOC118942821 wnt5b coding downstream 161967 225129 ~ 464574 (+)
LOC101268929 LOC101268929 coding downstream 416593 479755 ~ 566322 (+)
LOC118936449 LOC106575063 coding downstream 584747 647909 ~ 710000 (+)
LOC118942824 LOC106609805 coding downstream 789869 853031 ~ 999564 (+)
LOC110518351 LOC103459268 coding downstream 1093552 1156714 ~ 1305903 (+)
G1699284 NA non-coding upstream 7440 45650 ~ 55412 (+)
G1699274 NA non-coding upstream 30248 32283 ~ 32604 (+)
G1699302 NA non-coding downstream 24595 87757 ~ 95690 (+)
G1699304 NA non-coding downstream 36883 100045 ~ 100372 (+)
G1699307 NA non-coding downstream 40807 103969 ~ 104454 (+)
G1699306 NA non-coding downstream 41905 105067 ~ 107214 (+)
G1699253 NA non-coding downstream 86237 149399 ~ 204984 (+)
G1699629 NA other downstream 1019529 1082691 ~ 1086026 (+)
G1699655 NA other downstream 1030987 1094149 ~ 1100221 (+)
G1699724 LOC106592130 other downstream 1279337 1342499 ~ 1343138 (+)
G1699804 NA other downstream 1474794 1537956 ~ 1538880 (+)

Expression


Co-expression Network