G1700211


Basic Information

Item Value
gene id G1700211
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 82415 ~ 83331 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1945646
TGTCTGGCTTTCAGTGTGAAGAGACTGTATATATGTAGGTTCATTATCATGTCTGGCTTTCAGTGTGAAGAGACTGTATACATGTAGGCTCATTATCATGTCTGGCTTTCAGTGTGAAGAGACTGTATACATGTAGGCTCATTATCATGTCTGGTTTTCAGTGTGAAGGGACTGTATACATGTAGGCTCATTATCATGTCTGGCTTTCAGTGTGAAGAGACTGTATACATGTAGGTTCATTATCATGTCTGGCTTTCAGTGTGAAGAGACTGTATACATGTAGGCTCATTATCATGTCTGGCTTTCAGTGTGAAGAGACTGTATACATGTAGGTTCATTATCATGTCTGGCTTTCAGTGTGAAGAGACTGTATACATG
>TU1945649
ATTATCATGTCTGGCTTTCCGTGTGAAGAGACTGTATACATGTAGGCTCATTATCATGTCTGGCTTTCAGTGTGAAGAGACTGTATACATGTAGGTTCATTATCATGTCTGGCTTTCAGTGTGAAGAGACTGTATACATGTAGGCTCATTATCATGTCTGGCTTTCAGTGTGAAGAGACTGTATACATGTAGGTTCATTATCATGTCTGGCTTTCAGTGTGAAGAGACTGTATACATG
>TU1945650
TGTCTGGCTTTCAGTGTGAAGAGACTGTATATATGTAGGTTCATTATCATGTCTGGTTTTCAGTGTGAAGAGACTGTATACATGTAGGTTCATTATCATGTCTGGTTTTCAGTGTGAAGAGACTGTATACATGTAGGTTCATTATCATGTCTGGCTTTCAGTGTGAAGAGACTGTATACATGTAGGCTCATTATCATGTCTGGCTTTCAGTGTGAAGAGACTGTATACATGTAGGCTCATTATCATGTCTGGTTTTCAGTGTGAAGGGACTGTATACATGTAGGCTCATTATCATGTCTGGCTTTCAGTGTGAAGAGACTGTATACATGTAGGTTCATTATCATGTCTGGCTTTCAGTGTGAAGAGACTGTATACATGTAGGCTCATTATCATGTCTGGCTTTCAGTGTGAAGAGACTGTATACATGTAGGTTCATTATCATGTCTGGCTTTCAGTGTGAAGAGACTGTATACATG
>TU1945648
TGTCTGGCTTTCAGTGTGAAGAGACTGTATATATGTAGGTTCATTATCATGTCTGGTTTTCAGTGTGAAGAGACTGTATACATGTAGGCTCATTATCATGTCTGGCTTTCAGTGTGAAGAGACTGTATACATGTAGGCTCATTATCATGTCTGGTTTTCAGTGTGAAGGGACTGTATACATGTAGGTTCATTATCATGTCTGGCTTTCCGTGTGAAGAGACTGTATACATGTAGGTTCATTATCATGTCTGGTTTTCAGTGTGAAGGGACTGTATACATGTAGGTTCATTAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1945646 False 378 lncRNA 0.40 3 82415 83331
TU1945649 False 238 lncRNA 0.40 2 82415 82848
TU1945650 False 476 lncRNA 0.39 2 82415 83331
TU1945648 True 292 lncRNA 0.39 3 82893 83331

Neighbor

gene id symbol gene type direction distance location
LOC118942822 NA coding upstream 177783 261114 ~ 265635 (-)
LOC110517722 LOC106590767 coding upstream 262642 345973 ~ 348985 (-)
LOC118942823 NA coding upstream 498043 581374 ~ 597675 (-)
cacna2d4a cacna2d4 coding upstream 502404 585735 ~ 785374 (-)
LOC110516566 LOC106576623 coding upstream 741259 824590 ~ 851766 (-)
G1700204 NA non-coding downstream 7047 74586 ~ 75368 (-)
G1700222 NA non-coding upstream 20640 103971 ~ 106830 (-)
G1700236 NA non-coding upstream 44123 127454 ~ 129615 (-)
G1700229 NA non-coding upstream 81279 164610 ~ 204375 (-)
G1700248 NA non-coding upstream 84160 167491 ~ 177188 (-)
G1700253 NA non-coding upstream 89003 172334 ~ 173476 (-)
G1700312 NA other upstream 269156 352487 ~ 354509 (-)
LOC110511372 LOC106592130 other upstream 1235896 1319221 ~ 1348497 (-)
LOC118942825 frs2 other upstream 1285818 1363229 ~ 1446417 (-)
LOC110512520 LOC106609724 other upstream 2039198 2113042 ~ 2128710 (-)
G1701041 NA other upstream 2105102 2188433 ~ 2189666 (-)

Expression


Co-expression Network