Gene
RNA
| Item | Value |
|---|---|
| gene id | G1700268 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048585.1 |
| NCBI id | CM023239.2 |
| chromosome length | 64935962 |
| location | 227438 ~ 227996 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| SRSF protein kinase 3-like isoform X3 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1945723 | True | 394 | lncRNA | 0.42 | 2 | 227438 | 227996 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118942822 | NA | coding | upstream | 33118 | 261114 ~ 265635 (-) |
| LOC110517722 | LOC106590767 | coding | upstream | 117977 | 345973 ~ 348985 (-) |
| LOC118942823 | NA | coding | upstream | 353378 | 581374 ~ 597675 (-) |
| cacna2d4a | cacna2d4 | coding | upstream | 357739 | 585735 ~ 785374 (-) |
| LOC110516566 | LOC106576623 | coding | upstream | 596594 | 824590 ~ 851766 (-) |
| G1700264 | NA | non-coding | downstream | 8461 | 217445 ~ 218977 (-) |
| G1700229 | NA | non-coding | downstream | 23063 | 164610 ~ 204375 (-) |
| G1700248 | NA | non-coding | downstream | 50250 | 167491 ~ 177188 (-) |
| G1700255 | NA | non-coding | downstream | 51342 | 175693 ~ 176096 (-) |
| G1700253 | NA | non-coding | downstream | 53962 | 172334 ~ 173476 (-) |
| G1700277 | NA | non-coding | upstream | 17605 | 245601 ~ 245934 (-) |
| G1700290 | NA | non-coding | upstream | 40762 | 268758 ~ 268991 (-) |
| G1700305 | NA | non-coding | upstream | 103525 | 331521 ~ 332256 (-) |
| G1700310 | NA | non-coding | upstream | 122198 | 350194 ~ 354814 (-) |
| G1700312 | NA | other | upstream | 124491 | 352487 ~ 354509 (-) |
| LOC110511372 | LOC106592130 | other | upstream | 1091231 | 1319221 ~ 1348497 (-) |
| LOC118942825 | frs2 | other | upstream | 1141153 | 1363229 ~ 1446417 (-) |
| LOC110512520 | LOC106609724 | other | upstream | 1894533 | 2113042 ~ 2128710 (-) |
| G1701041 | NA | other | upstream | 1960437 | 2188433 ~ 2189666 (-) |
