G1700290


Basic Information

Item Value
gene id G1700290
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 268758 ~ 268991 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1945746
GTTAATGCTAGGTTAGGTTAATGCTAGGTTAGGTTAATGCAAGGTTAGGTTAATGCTAGGTTAATGCAAGGTTAGGTTAATGCTAGGTTAGGTTAATACTAGGTTAGATTAACGCTAGGTTAATGCTAGGTTAATGCTAGGTTAATGCTAGGTTAAGTTAATGCTAGGGTAGGTTACTGCTAGGTTAATGCTAGGTTAGATTAATAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1945746 True 207 lncRNA 0.36 2 268758 268991

Neighbor

gene id symbol gene type direction distance location
LOC118942822 NA coding downstream 3123 261114 ~ 265635 (-)
LOC110517722 LOC106590767 coding upstream 76982 345973 ~ 348985 (-)
LOC118942823 NA coding upstream 312383 581374 ~ 597675 (-)
cacna2d4a cacna2d4 coding upstream 316744 585735 ~ 785374 (-)
LOC110516566 LOC106576623 coding upstream 555599 824590 ~ 851766 (-)
LOC110511372 LOC106592130 coding upstream 1050230 1319221 ~ 1348497 (-)
G1700232 NA non-coding downstream 11046 195319 ~ 257712 (-)
G1700277 NA non-coding downstream 22824 245601 ~ 245934 (-)
G1700268 NA non-coding downstream 40762 227438 ~ 227996 (-)
G1700264 NA non-coding downstream 49781 217445 ~ 218977 (-)
G1700305 NA non-coding upstream 62530 331521 ~ 332256 (-)
G1700310 NA non-coding upstream 81203 350194 ~ 354814 (-)
G1700311 NA non-coding upstream 82663 351654 ~ 352441 (-)
G1700318 NA non-coding upstream 101906 370897 ~ 372853 (-)
G1700319 NA non-coding upstream 108218 377209 ~ 413123 (-)
G1700312 NA other upstream 83496 352487 ~ 354509 (-)
LOC118942825 frs2 other upstream 1100158 1363229 ~ 1446417 (-)
LOC110512520 LOC106609724 other upstream 1853538 2113042 ~ 2128710 (-)
G1701041 NA other upstream 1919442 2188433 ~ 2189666 (-)

Expression


Co-expression Network