G1699363


Basic Information

Item Value
gene id G1699363
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 278141 ~ 281102 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1944478
cactgatgctcctttagagctgagcagagacacacacactgatgctcctctagagctgagcagagacacacactgatgctcctctagagctgagcagagacacacactgatgctcctctagagctgagcagagacacacacactgatgctcctctagagctgagcagacacacacactgatgctcttctagagctgagcagagacac
>TU1944476
acacacactgatgctcctctagagcagagacacacactgatgctcctctagagcagagacacacactgatgctcctctagagctgagcagagacacacacactgatgctcctctagagctgagcagagacacacacactgatgctcctctagagcagagacacacactgatgctcctctagagcagagacacacactgatgctcctctagagcagagctgagacacacacactgatgctcctctagagctgagcagagacacacacactgatgctcctttagagctgagcagagacacacacactgatgctcctctagagctgagcagagacacacacactgatgctcctctagagcagagacacacacactgatgctcctctagagctgagcagagacacactgactgatgctcttctagagctgagcagagacac
>TU1944477
acacacactgatgctcctctagagctgagcagagacacacacactgatgctcctctagagctgagacacacacactgatgctcctctagagctgagcagagacacacacactgatgctcctttagagctgagcagagacacacacactgatgctcctctagagctgagcagagacacacacactgatgctcctctagagcagagacacacacactgatgctcctctagagctgagcagagacacactgatgctcctctagagcagagacacacacactgatgctcctctagagctgagcagagacacacactgatgctcctctagagctgagcagagacacacacactgatgctcctctagagctgagcagagacacacacactgatgctcctctagagct

Function

NR:

description
PREDICTED: uncharacterized protein LOC106589955

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1944478 False 207 lncRNA 0.52 2 278141 280770
TU1944476 False 437 lncRNA 0.52 3 278782 280770
TU1944477 True 401 lncRNA 0.52 2 279482 281102

Neighbor

gene id symbol gene type direction distance location
LOC118942820 LOC108442871 coding upstream 83923 60262 ~ 194218 (+)
LOC101268929 LOC101268929 coding downstream 198653 479755 ~ 566322 (+)
LOC118936449 LOC106575063 coding downstream 366807 647909 ~ 710000 (+)
LOC118942824 LOC106609805 coding downstream 571929 853031 ~ 999564 (+)
LOC110518351 LOC103459268 coding downstream 875612 1156714 ~ 1305903 (+)
LOC110499702 tcpb coding downstream 1195778 1476880 ~ 1487165 (+)
G1699360 NA non-coding upstream 5058 272770 ~ 273083 (+)
G1699354 NA non-coding upstream 13428 263770 ~ 264713 (+)
G1699347 NA non-coding upstream 44147 232924 ~ 233994 (+)
G1699253 NA non-coding upstream 73157 149399 ~ 204984 (+)
G1699326 NA non-coding upstream 118495 159023 ~ 159646 (+)
G1699374 NA non-coding downstream 50416 331518 ~ 332270 (+)
G1699375 NA non-coding downstream 55053 336155 ~ 336441 (+)
G1699376 NA non-coding downstream 55430 336532 ~ 338571 (+)
G1699378 NA non-coding downstream 69094 350196 ~ 350803 (+)
G1699379 NA non-coding downstream 73477 354579 ~ 355244 (+)
G1699629 NA other downstream 801589 1082691 ~ 1086026 (+)
G1699655 NA other downstream 813047 1094149 ~ 1100221 (+)
G1699724 LOC106592130 other downstream 1061397 1342499 ~ 1343138 (+)
G1699804 NA other downstream 1256854 1537956 ~ 1538880 (+)

Expression


Co-expression Network