G1699374


Basic Information

Item Value
gene id G1699374
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 331518 ~ 332270 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1944489
ctttgtcattatggggtattgtgatgtcattatggggtattgtgatgtcattatggggtattgtgatgtcattatggggtattgtgatgtcattatgggctattgtgtgtcgATTAATAATAAAAGGCTGTGACGTAACGaagtgtggaaaaggtcaaggggtcagaaaactttccgaatgctctgtaacCGTGTTACTGAGAGACAATGTGTAACCGTGTTACTGAGAGAcaatgtgtaactgtgttactgagagacaatgtgtaactgtgttactgagagacaatgtgtaactgtgttactgagagacaatgtgtaactgtgttactgAGAGACAATGTCTAACTGTGTTACTGAGAGAcaatgtgtaactgtgttactgAGAGACAATGTCTAACTGTGTTACTGAGAGACAATGTCTAACTGTGTTACTGAGAGACAATGTCTAACTGTGTTACTGAGAGAcaatgtgtaactgtgttactgAGAGACAATGTGTAACCGTGTTACTGAGAGACAATGTGTAACTGTGTTATTGGCTGGAC

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1944489 True 545 lncRNA 0.40 2 331518 332270

Neighbor

gene id symbol gene type direction distance location
LOC118942820 LOC108442871 coding upstream 137300 60262 ~ 194218 (+)
LOC101268929 LOC101268929 coding downstream 147485 479755 ~ 566322 (+)
LOC118936449 LOC106575063 coding downstream 315639 647909 ~ 710000 (+)
LOC118942824 LOC106609805 coding downstream 520761 853031 ~ 999564 (+)
LOC110518351 LOC103459268 coding downstream 824444 1156714 ~ 1305903 (+)
LOC110499702 tcpb coding downstream 1144610 1476880 ~ 1487165 (+)
G1699363 NA non-coding upstream 50416 278141 ~ 281102 (+)
G1699360 NA non-coding upstream 58435 272770 ~ 273083 (+)
G1699354 NA non-coding upstream 66805 263770 ~ 264713 (+)
G1699347 NA non-coding upstream 97524 232924 ~ 233994 (+)
G1699253 NA non-coding upstream 126534 149399 ~ 204984 (+)
G1699375 NA non-coding downstream 3885 336155 ~ 336441 (+)
G1699376 NA non-coding downstream 4262 336532 ~ 338571 (+)
G1699378 NA non-coding downstream 17926 350196 ~ 350803 (+)
G1699379 NA non-coding downstream 22309 354579 ~ 355244 (+)
G1699392 NA non-coding downstream 47288 379558 ~ 380703 (+)
G1699629 NA other downstream 750421 1082691 ~ 1086026 (+)
G1699655 NA other downstream 761879 1094149 ~ 1100221 (+)
G1699724 LOC106592130 other downstream 1010229 1342499 ~ 1343138 (+)
G1699804 NA other downstream 1205686 1537956 ~ 1538880 (+)

Expression


Co-expression Network