G1699376


Basic Information

Item Value
gene id G1699376
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 336532 ~ 338571 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1944492
cttaatctgtgtcctggGAAACCAGCCCAATAACACAGTAACTGAACCTCTTTATCTCTGGTACAGGCAGCAGGTTTGTGTGTCTATATCTCTGGTACAGGCAGCAGGTTTGTGTGTCTACATCTCTGGTACAGGCAGCAGGTTTGTGTGTCTATATCTCTGGTACAGGCAGCAGGTTTGTGTGTCTACATCTCTGGTACAGGCAGCAGgtttctatagtgaggtgcagtagacagcaggtttctatagtgaggtgcggtagacagcaggtttctatagtgaggtgcggtatacagcaggtttctatagtgaggtgcagtagacagcaggtttctatagtgagctgcagtagacagcaggtttctatagtgaggtgcagtagacagcaggtttctatagtgaggtgcagtag
>TU1944493
cttaatctgtgtcctggGAAACCAGCCCAATAACACAGTAACTGAACCTCTTTATCTCTGGTACAGGCAGCAGGTTTGTGTGTCTATATCTCTGGTACAGGCAGCAGGTTTGTGTGTCTACATCTCTGGTACAGGCAGCAGGTTTGTGTGTCTACATCTCTGGTACAGGCAGCAGGTTTGTGTGTCTACATCTCTGGTACAGGCAGCAGGTTTGTGTGTCTATATCTCTGGTACAGGCAGCAGGTTTGTGTGTCTACATCTCTGGTACAGGCAGCAGGTTTGTGTGTCTATATCTCTGGTACAGGCAGCAGGTTTGTGTGTCTATATCTCTGGAACAggcagcaggtttctatagtgaggtgcagtagacagcaggtttctatagtgaggtgcagtagacagcaggttt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1944492 False 412 lncRNA 0.47 3 336532 338571
TU1944493 True 409 lncRNA 0.48 2 336532 336974

Neighbor

gene id symbol gene type direction distance location
LOC118942820 LOC108442871 coding upstream 142314 60262 ~ 194218 (+)
LOC101268929 LOC101268929 coding downstream 141184 479755 ~ 566322 (+)
LOC118936449 LOC106575063 coding downstream 309338 647909 ~ 710000 (+)
LOC118942824 LOC106609805 coding downstream 514460 853031 ~ 999564 (+)
LOC110518351 LOC103459268 coding downstream 818143 1156714 ~ 1305903 (+)
LOC110499702 tcpb coding downstream 1138309 1476880 ~ 1487165 (+)
G1699375 NA non-coding upstream 91 336155 ~ 336441 (+)
G1699374 NA non-coding upstream 4262 331518 ~ 332270 (+)
G1699363 NA non-coding upstream 55430 278141 ~ 281102 (+)
G1699360 NA non-coding upstream 63449 272770 ~ 273083 (+)
G1699354 NA non-coding upstream 71819 263770 ~ 264713 (+)
G1699378 NA non-coding downstream 11625 350196 ~ 350803 (+)
G1699379 NA non-coding downstream 16008 354579 ~ 355244 (+)
G1699392 NA non-coding downstream 40987 379558 ~ 380703 (+)
G1699394 NA non-coding downstream 44476 383047 ~ 383587 (+)
G1699417 NA non-coding downstream 111242 449813 ~ 458086 (+)
G1699629 NA other downstream 744120 1082691 ~ 1086026 (+)
G1699655 NA other downstream 755578 1094149 ~ 1100221 (+)
G1699724 LOC106592130 other downstream 1003928 1342499 ~ 1343138 (+)
G1699804 NA other downstream 1199385 1537956 ~ 1538880 (+)

Expression


Co-expression Network