G1699379


Basic Information

Item Value
gene id G1699379
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 354579 ~ 355244 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1944500
atagtagtggtagtagtagtagtagtagtggtagtggtagtagtagtagtagtagtggtagtagtagtagtggtagtggtagtagtggtagtagtagtagtagtggtagtagtaatagtggtagtattagaagtagtggtagtactagtagtagtggtagtactagtagtagtggtggtagtagtagtagaagtgttggtggtaatagtagtagtggtagtgg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1944500 True 223 lncRNA 0.39 2 354579 355244

Neighbor

gene id symbol gene type direction distance location
LOC118942820 LOC108442871 coding upstream 160361 60262 ~ 194218 (+)
LOC101268929 LOC101268929 coding downstream 124511 479755 ~ 566322 (+)
LOC118936449 LOC106575063 coding downstream 292665 647909 ~ 710000 (+)
LOC118942824 LOC106609805 coding downstream 497787 853031 ~ 999564 (+)
LOC110518351 LOC103459268 coding downstream 801470 1156714 ~ 1305903 (+)
LOC110499702 tcpb coding downstream 1121636 1476880 ~ 1487165 (+)
G1699378 NA non-coding upstream 3776 350196 ~ 350803 (+)
G1699376 NA non-coding upstream 16008 336532 ~ 338571 (+)
G1699375 NA non-coding upstream 18138 336155 ~ 336441 (+)
G1699374 NA non-coding upstream 22309 331518 ~ 332270 (+)
G1699363 NA non-coding upstream 73477 278141 ~ 281102 (+)
G1699392 NA non-coding downstream 24314 379558 ~ 380703 (+)
G1699394 NA non-coding downstream 27803 383047 ~ 383587 (+)
G1699417 NA non-coding downstream 94569 449813 ~ 458086 (+)
G1699418 NA non-coding downstream 96015 451259 ~ 453942 (+)
G1699421 NA non-coding downstream 99942 455186 ~ 456323 (+)
G1699629 NA other downstream 727447 1082691 ~ 1086026 (+)
G1699655 NA other downstream 738905 1094149 ~ 1100221 (+)
G1699724 LOC106592130 other downstream 987255 1342499 ~ 1343138 (+)
G1699804 NA other downstream 1182712 1537956 ~ 1538880 (+)

Expression


Co-expression Network