Gene
RNA
| Item | Value |
|---|---|
| gene id | G1700318 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048585.1 |
| NCBI id | CM023239.2 |
| chromosome length | 64935962 |
| location | 370897 ~ 372853 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1945783 | True | 276 | lncRNA | 0.34 | 2 | 370897 | 372853 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110517722 | LOC106590767 | coding | downstream | 21912 | 345973 ~ 348985 (-) |
| LOC118942822 | NA | coding | downstream | 105262 | 261114 ~ 265635 (-) |
| LOC118942823 | NA | coding | upstream | 208521 | 581374 ~ 597675 (-) |
| cacna2d4a | cacna2d4 | coding | upstream | 212882 | 585735 ~ 785374 (-) |
| LOC110516566 | LOC106576623 | coding | upstream | 451737 | 824590 ~ 851766 (-) |
| LOC110511372 | LOC106592130 | coding | upstream | 946368 | 1319221 ~ 1348497 (-) |
| LOC110527029 | LOC106592131 | coding | upstream | 975746 | 1348599 ~ 1357031 (-) |
| G1700310 | NA | non-coding | downstream | 16083 | 350194 ~ 354814 (-) |
| G1700311 | NA | non-coding | downstream | 18456 | 351654 ~ 352441 (-) |
| G1700305 | NA | non-coding | downstream | 38641 | 331521 ~ 332256 (-) |
| G1700290 | NA | non-coding | downstream | 101906 | 268758 ~ 268991 (-) |
| G1700319 | NA | non-coding | upstream | 4356 | 377209 ~ 413123 (-) |
| G1700358 | NA | non-coding | upstream | 104050 | 476903 ~ 550576 (-) |
| G1700365 | NA | non-coding | upstream | 115441 | 488294 ~ 489821 (-) |
| G1700385 | NA | non-coding | upstream | 169588 | 542441 ~ 543472 (-) |
| G1700392 | NA | non-coding | upstream | 172197 | 545050 ~ 587313 (-) |
| G1700312 | NA | other | downstream | 16388 | 352487 ~ 354509 (-) |
| LOC118942825 | frs2 | other | upstream | 996296 | 1363229 ~ 1446417 (-) |
| LOC110512520 | LOC106609724 | other | upstream | 1749676 | 2113042 ~ 2128710 (-) |
| G1701041 | NA | other | upstream | 1815580 | 2188433 ~ 2189666 (-) |
| G1701824 | NA | other | upstream | 2199821 | 2572603 ~ 2577051 (-) |
