G1699392


Basic Information

Item Value
gene id G1699392
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 379558 ~ 380703 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1944516
gagagggaacgtatagaaggtcaactaggaggagagaggtcaactaggaggagagagaacgtatAGAAgatcaactaggaggagagaggtcaactaggaggagagggaacgtatagaaggtcaactaggaggagagaggtcaactaggaggagagaggtcaactaggaggagagagaacgtatagaagatcaactaggaggagagaggtcaactaggaggagagggaacgtatagaaggtc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1944516 True 241 lncRNA 0.49 2 379558 380703

Neighbor

gene id symbol gene type direction distance location
LOC118942820 LOC108442871 coding upstream 185340 60262 ~ 194218 (+)
LOC101268929 LOC101268929 coding downstream 99052 479755 ~ 566322 (+)
LOC118936449 LOC106575063 coding downstream 267206 647909 ~ 710000 (+)
LOC118942824 LOC106609805 coding downstream 472328 853031 ~ 999564 (+)
LOC110518351 LOC103459268 coding downstream 776011 1156714 ~ 1305903 (+)
LOC110499702 tcpb coding downstream 1096177 1476880 ~ 1487165 (+)
G1699379 NA non-coding upstream 24314 354579 ~ 355244 (+)
G1699378 NA non-coding upstream 28755 350196 ~ 350803 (+)
G1699376 NA non-coding upstream 40987 336532 ~ 338571 (+)
G1699375 NA non-coding upstream 43117 336155 ~ 336441 (+)
G1699374 NA non-coding upstream 47288 331518 ~ 332270 (+)
G1699394 NA non-coding downstream 2344 383047 ~ 383587 (+)
G1699417 NA non-coding downstream 69110 449813 ~ 458086 (+)
G1699418 NA non-coding downstream 70556 451259 ~ 453942 (+)
G1699421 NA non-coding downstream 74483 455186 ~ 456323 (+)
G1699451 NA non-coding downstream 159622 540325 ~ 542009 (+)
G1699629 NA other downstream 701988 1082691 ~ 1086026 (+)
G1699655 NA other downstream 713446 1094149 ~ 1100221 (+)
G1699724 LOC106592130 other downstream 961796 1342499 ~ 1343138 (+)
G1699804 NA other downstream 1157253 1537956 ~ 1538880 (+)

Expression


Co-expression Network