G1699451


Basic Information

Item Value
gene id G1699451
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 540325 ~ 542009 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1944587
ggaatagggctctggtctaaagtagtgcactatatagggaatagggctctggtctaaagtagtgcactatatagggctccaggttGACCAGGTTTGCCTGGAGAGACGTTGGTATCACATGAGTGGTCACCAGACCTTTAGGTGGAAAactgtacacacacctcacatttccctcctctgacactgtacacacacctcacattcccctcctctgacactgtacacacacctcacatttccctcctcctctgacactgtacacacacctcacatttccctcctccttctctcctctatcATCCCCAACACAGATATTACATAGAGAGGTCTGTGGAATAGTAGTCTAACACAGATATTACATAGACTACTGTTCCACAGGCCTCCCTAACACAGATATTATCCGGGTGTCCCTTCACCCTGAACATCAAATGGGAATAAGAGAGAAACACACGAAAGAGAACACTCTTTATA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1944587 True 471 lncRNA 0.46 3 540325 542009

Neighbor

gene id symbol gene type direction distance location
LOC118942821 wnt5b coding upstream 75751 225129 ~ 464574 (+)
LOC118942820 LOC108442871 coding upstream 346107 60262 ~ 194218 (+)
LOC118936449 LOC106575063 coding downstream 105900 647909 ~ 710000 (+)
LOC118942824 LOC106609805 coding downstream 311022 853031 ~ 999564 (+)
LOC110518351 LOC103459268 coding downstream 614705 1156714 ~ 1305903 (+)
LOC110499702 tcpb coding downstream 934871 1476880 ~ 1487165 (+)
LOC118943024 NA coding downstream 942018 1484027 ~ 1484168 (+)
G1699417 NA non-coding upstream 82239 449813 ~ 458086 (+)
G1699421 NA non-coding upstream 84002 455186 ~ 456323 (+)
G1699418 NA non-coding upstream 86383 451259 ~ 453942 (+)
G1699394 NA non-coding upstream 156738 383047 ~ 383587 (+)
G1699392 NA non-coding upstream 159622 379558 ~ 380703 (+)
G1699452 NA non-coding downstream 1256 543265 ~ 543981 (+)
G1699455 NA non-coding downstream 6307 548316 ~ 585797 (+)
G1699456 NA non-coding downstream 14721 556730 ~ 559701 (+)
LOC101268929 LOC101268929 non-coding downstream 21760 479755 ~ 566322 (+)
G1699462 NA non-coding downstream 43982 585991 ~ 589388 (+)
G1699629 NA other downstream 540682 1082691 ~ 1086026 (+)
G1699655 NA other downstream 552140 1094149 ~ 1100221 (+)
G1699724 LOC106592130 other downstream 800490 1342499 ~ 1343138 (+)
G1699804 NA other downstream 995947 1537956 ~ 1538880 (+)

Expression


Co-expression Network