G1700392


Basic Information

Item Value
gene id G1700392
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 545050 ~ 587313 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1945881
atcatagatactccttgttgttgttgttgttttgtgtgttggtattgtatcatagatactccttgttgttgttaCGTGTGTTGGCATTGTAAcatagatactccttgttgtttagtgtgttggtattgtatcatagatactccttgttgttgttaCGTGTGTTGGCATTGTAAcatagatactccttgttgtttagtgtgttggtattgtatcatagatactccttgttgttgttgtttagtgtgttggtattgtatcatagatactccttgttgttgttgtttagtgtgttggtattgtatcatagatactccttgttgttgtttagtgtgttggtattgtatcatagatactccttgttgttgtttagcgtgttggtattgtatcatagatactccttgttgttgtttagtgtgttggtattgtatcatagatactccttgttgttgtttagcgtgttggtattgtatcatagatactccttgttgttgttgttgtttagtgtgttggtattgtatcatagatactccttgttgttgtttagcgtgttggtattgtatcatagatactccttgttgttgtttagtgtgttggtattgtatcatagatactccttgttgttgttttttgtgtgttggtattgtatcatagatactccttgttgttgttgtgtgtgtt

Function

NR:

description
Mucin-1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1945881 True 678 lncRNA 0.34 3 545050 587313

Neighbor

gene id symbol gene type direction distance location
LOC110517722 LOC106590767 coding downstream 196065 345973 ~ 348985 (-)
LOC118942822 NA coding downstream 279415 261114 ~ 265635 (-)
LOC110516566 LOC106576623 coding upstream 237277 824590 ~ 851766 (-)
LOC110511372 LOC106592130 coding upstream 731908 1319221 ~ 1348497 (-)
LOC110527029 LOC106592131 coding upstream 761286 1348599 ~ 1357031 (-)
LOC118942825 frs2 coding upstream 775916 1363229 ~ 1446417 (-)
LOC110499705 LOC106609801 coding upstream 861491 1448804 ~ 1453886 (-)
G1700385 NA non-coding downstream 1578 542441 ~ 543472 (-)
G1700365 NA non-coding downstream 55229 488294 ~ 489821 (-)
G1700319 NA non-coding downstream 131927 377209 ~ 413123 (-)
G1700318 NA non-coding downstream 172197 370897 ~ 372853 (-)
G1700310 NA non-coding downstream 190236 350194 ~ 354814 (-)
G1700393 NA non-coding upstream 271 587584 ~ 588894 (-)
G1700444 NA non-coding upstream 87222 674535 ~ 675992 (-)
G1700445 NA non-coding upstream 88796 676109 ~ 676602 (-)
G1700453 NA non-coding upstream 99571 686884 ~ 687473 (-)
G1700459 NA non-coding upstream 113222 700535 ~ 700900 (-)
G1700312 NA other downstream 190541 352487 ~ 354509 (-)
LOC110512520 LOC106609724 other upstream 1535216 2113042 ~ 2128710 (-)
G1701041 NA other upstream 1601120 2188433 ~ 2189666 (-)
G1701824 NA other upstream 1985361 2572603 ~ 2577051 (-)

Expression


Co-expression Network