G1699455


Basic Information

Item Value
gene id G1699455
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 548316 ~ 585797 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1944591
ctctctgtctctctgtctctctgtctctctgtctctctgtctgtctgtctctctgtctctctgtctctctgtctctctgtctctctgtctctctgtctctctgtctctctgtctctctgtctctctctctctctgtctctctctgtctctctgtctctctgtctctctgtctctctgtctctctgtctctctgtctctctgtctctctgtctctctgtctctctgtctctctctctgtctctctgtctctctgtctctctgtctctctgtctctctgtctctctgtctctctctgtctgtct
>TU1944592
ctctctgtctctctgtctctctgtctctctgtctctctgtctgtctgtctctctgtctctctgtctctctgtctctctgtctctctgtctctctgtctctctgtctctctgtctctctgtctctctctctctctctctctctgtctctctgtctctctctgtctctctgtctctctctgtctctctgtctctctgtctctctgtctctctgtctctctgtctctctgtctctctgtctctctgtctctctgtctctgtctctctgtctctctctctctctgtctctctgtctctctgtctctgtctctctgtctctgtctctctgtctctctgtctctctgtctctctgtctctctgtctctctgtctctctgtctctctgtctctctgtctctctgtctgtctctctgtctctctttctc
>TU1944597
ctctctgtctctctgtctctctgtctctctgtctctctgtctgtctgtctctctgtctctctgtctctctgtctctctgtctctctgtctctctgtctctctgtctctctgtctctctgtctctctctctctctgtctctctctgtctctctgtctctctgtctctctgtctctctgtctctctgtctctctgtctctctgtctctctgtctctctgtctctctgtctctctctctgtctctctctctctctgtctctctgtctctctgtctctctgtctctctctctgtctctctgtctctctgtctctctgtctctctgtctctctctgtctctctgtctctctgtctctgtctctctctgtctctgtctctctctgtctctctgtctctctctgtctctctgtctctctctctctctctgtctctctctgtctctgtctctctctgtctctgtctctctctgtctctctgtctct
>TU1944598
ctctctgtctctctgtctctctgtctctctgtctctctgtctgtctgtctctctgtctctctgtctctctgtctctctgtctctctgtctctctgtctctctgtctctctgtctctctgtctctctctctctctgtctctctctgtctctctgtctctctgtctctctgtctctctgtctctctgtctctctgtctctctgtctctctgtctctctgtctctctgtctctctctctgtctctctgtctctctgtctctctgtctctctgtctctctgtctctctgtctctctgtctctctgtctctctgtctctctgtgtctctctgtctctctgtctctctgtctctctgtctctctgtgtctctctgtctctctgtctctctgtctctctgtctctctgtctctctgtctctctgtctctctctctctctctctgtctctctctctctctctctgtctctctctctctctgtctctctctctctctctctctctctctctgtctctctctctctctctctctctctctctctgtctctgtctctg
>TU1944600
ctctctgtctctctgtctctctgtctctctgtctctctgtctgtctgtctctctgtctctctgtctctctgtctctctgtctctctgtctctctgtctctctgtctctctgtctctctgtctctctctctctctctctctctgtctctctgtctctctctgtctctctgtctctctctgtctctctgtctctctgtctctctgtctctctgtctctctgtctctctgtctctctgtctctctgtctctctgtctctgtctctctgtctctctctgtctgtctctgtctctctgtctctctgtctctctgtctctctgtctctctgtctctctgtctctctgtctctctgtctctctgtctctctgtctctctctgtctctctgtctctctctgtctctctgtctctctgtctctctgtctctctctgtctctctgtctctctctgtctctct
>TU1944595
tctgtctctctctctctgtctctctctctgtctctctgtctctctctgtctctctgtctctctctgtctctctgtctctctgtctctctgtctctctgtctctctgtctctctgtctctctgtctctctgtctctctgtctctgtctctctgtctctctctgtctgtctctgtctctctgtctctctgtctctctgtctctctgtctctctgtctctctgtctctctgtctctctgtctctctgtctctctgtctctctctgtctctctgtctctctgtctctgtctctctctgtctctgtctctctctgtctctctgtctctctctgtctctctgtctctctctctctctctgtctctctctgtctctgtctctctctgtctctgtctctctctgtctctctgtctct
>TU1944599
tctgtctctctctctctgtctctctctctgtctctctgtctctctctgtctctctgtctctctctgtctctctgtctctctgtctctctgtctctctgtctctctgtctctctgtctctctgtctctctgtctctctgtctctgtctctctgtctctctctgtctgtctctgtctctctgtctctctgtctctctgtctctctgtctctctgtctctctgtctctctgtctctctgtctctctgtctctctgtctctctctgtctctctgtctctctctgtctctctgtctctctgtctctctgtctctctctgtctctctgtctctctctgtctctct
>TU1944596
tctgtctctctctctgtctctctgtctctctctctctctctctctctctctctctctctctctgtctctgtctcgctgtctctctgtctctctgtctctctgtctgtctctgtctctgtctctctctctctctctgtctctgtctctgtctctctgtctctgtctctgtctctctgtctctctgtctctctgtctctgtctctctgtctctgtctctctgtctctctgtctctctgtctctctgtctctctgtctctctgtctctctgtctctctgtctctctgtctctctgtctgtctctctgtctctctttctc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1944591 False 302 lncRNA 0.50 2 548316 585797
TU1944592 False 421 lncRNA 0.50 3 548316 551808
TU1944597 False 478 lncRNA 0.50 3 548316 551281
TU1944598 False 547 lncRNA 0.50 2 548316 549424
TU1944600 False 452 lncRNA 0.50 3 548316 549769
TU1944595 False 409 lncRNA 0.50 2 548757 551281
TU1944599 False 339 lncRNA 0.50 2 548757 549769
TU1944596 True 316 lncRNA 0.50 2 550765 551808

Neighbor

gene id symbol gene type direction distance location
LOC118942821 wnt5b coding upstream 83742 225129 ~ 464574 (+)
LOC118942820 LOC108442871 coding upstream 354098 60262 ~ 194218 (+)
LOC118936449 LOC106575063 coding downstream 62112 647909 ~ 710000 (+)
LOC118942824 LOC106609805 coding downstream 267234 853031 ~ 999564 (+)
LOC110518351 LOC103459268 coding downstream 570917 1156714 ~ 1305903 (+)
LOC110499702 tcpb coding downstream 891083 1476880 ~ 1487165 (+)
LOC118943024 NA coding downstream 898230 1484027 ~ 1484168 (+)
G1699452 NA non-coding upstream 4335 543265 ~ 543981 (+)
G1699451 NA non-coding upstream 6307 540325 ~ 542009 (+)
G1699417 NA non-coding upstream 90230 449813 ~ 458086 (+)
G1699421 NA non-coding upstream 91993 455186 ~ 456323 (+)
G1699418 NA non-coding upstream 94374 451259 ~ 453942 (+)
G1699462 NA non-coding downstream 194 585991 ~ 589388 (+)
G1699463 NA non-coding downstream 40957 626754 ~ 778190 (+)
G1699488 NA non-coding downstream 85287 671084 ~ 674195 (+)
G1699510 NA non-coding downstream 142637 728434 ~ 729118 (+)
G1699513 NA non-coding downstream 152270 738067 ~ 743248 (+)
G1699629 NA other downstream 496894 1082691 ~ 1086026 (+)
G1699655 NA other downstream 508352 1094149 ~ 1100221 (+)
G1699724 LOC106592130 other downstream 756702 1342499 ~ 1343138 (+)
G1699804 NA other downstream 952159 1537956 ~ 1538880 (+)

Expression


Co-expression Network