G1699463


Basic Information

Item Value
gene id G1699463
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 626754 ~ 778190 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1944621
gagagggagagggagagagagagacagagagagagagagagagacagagagagagagacagagagagacagagacagagatagagacagagagagagagagagagagagagagagagagacagagggagacagagagagagacagagagagagagagagagagacagagagagagagacagagagaaagagagagggggagagaaagagagagaaagagagagggggagagaaagagagagagagagagagagagagagccagagagagaga
>TU1944615
GTAGCAACAGTGCCACCCGGAGGTAGAAGGGAGCATAGCACGGTGCACGAGCGGAACTGCCGTGTGTGTGAATGAGGACATTTTGAAAATCATTCTTATACCTTGAAATAACGTGAGAAACAAAGCAATTTCATGTGTGACAATATTTTATATATAATTTAGGTCTCATCTTTCTTCATTCTGAATTAAACACGAGATTTGATCAGGGTGCTTCAAAAACCTCATTTTCTTCAAACGGGCTCTTCTAAGACGTCTGAACGCGCTGTCAGAGTTCCTATATGTTTGTCATTAACTCATTACATATCCTGAAGAAGTTCTATATAATAGTACATATGTATCAAGTAATATAATACAATGTCTAGACATTTTCTGAACAGTGTCTCCGAGAATAACATTGAAAATAGTATTATTGAAATAACTCGAAAGCATAAGAGGGGTGAGTTGCTATAAAACCCCATCGTCTTTATTGTCGTGTTGATTGTGGTAAATACTATTATAATATGAACTAACTATACCCGAAGATAAGTATTATGGGTGATGAAATGACCCTGCTGCGTTCCTGTCAGTGTAGCCTGTAGTATAATACTGGTTCCTGCATTCATTACAGACTGGTTCATTACAGACTGGTTCATTACAGACTGGTTAATTACAGACTGGTTCATTACAGACTGTTGCAATGATGTCACTGAGAATCAAGGCTGCGACGCACTTGTGTAGTGTACAATATGAGGATTGTCCTCAACTAACCAACTGTCAATCAACGAGGGTGATCAACAACAATAAAACACTAACGTTATGTTGAACGCATCCCCAAAGACGGCATGGCTctaacctgatcccagatctgtttgttctcttGGCAACTTAACTTAttgctgtcattgtcaagccaaacatgttTTAGCGTGACAAGGAGTGACAAGTAGTTGGCATGATGGCACCAACAGACTGGTACTGCTTTGATCTAGTGGTTAATAATCCCTATTAATGTGAATACAGGCCCGAGGCCTGAGTAATTACATAAGGCACTACCTATTACCAGAGTGtgggcactagatagggaatagggttgccatttgggacgtaacccaGGTCTGGCATCTGTTGGTATGGATGAAGCACAATGATGTGGCTGTTGTTTAAACTCATGTTGGGAGaaaaaagatagaaagagagagtgagcgagagtgagcgagacagagagggagagagagagagagagagagagagagagagagagagagagagagagagtgagagagagagagagagagagagagagagagaaagtgtgtgagagagagagagagagagagagagaaagtgtgtgagagagagagcgagagagagaaagagacagacagagagagagagatagagaaagtgtgtgagagagcaagagaaagacagagagagagagagacagagagagagacagagagagagagagagacagagagagagagagagaaagagagagggggagagaaagagagagaaagagagagggggagagaaagagagagagagagagacagagagagagagagagagagagagagacagagacagagagagagagagacagagcgttgCCCCTTGAAGTGGGCTTGGATGAATCTCCTCTATTCTGCCTTGTTATTTAATTTTACCGTCCATTAATTTATTCTATATTTTattctatatttatttatttacctctCTGTCGTTTTTTCTAAGATTGTTATAATGAAACTATAAGGGATGATACTAAAATGCTTCTTTATTTTTTGCTGAAGATAACAAGCTGTTTGAAATAACATTTgtgggcatat
>TU1944617
GTAGCAACAGTGCCACCCGGAGGTAGAAGGGAGCATAGCACGGTGCACGAGCGGAACTGCCGTGTGTGTGAATGAGGACATTTTGAAAATCATTCTTATACCTTGAAATAACGTGAGAAACAAAGCAATTTCATGTGTGACAATATTTTATATATAATTTAGGTCTCATCTTTCTTCATTCTGAATTAAACACGAGATTTGATCAGGGTGCTTCAAAAACCTCATTTTCTTCAAACGGGCTCTTCTAAGACGTCTGAACGCGCTGTCAGAGTTCCTATATGTTTGTCATTAACTCATTACATATCCTGAAGAAGTTCTATATAATAGTACATATGTATCAAGTAATATAATACAATGTCTAGACATTTTCTGAACAGTGTCTCCGAGAATAACATTGAAAATAGTATTATTGAAATAACTCGAAAGCATAAGAGGGGTGAGTTGCTATAAAACCCCATCGTCTTTATTGTCGTGTTGATTGTGGTAAATACTATTATAATATGAACTAACTATACCCGAAGATAAGTATTATGGGTGATGAAATGACCCTGCTGCGTTCCTGTCAGTGTAGCCTGTAGTATAATACTGGTTCCTGCATTCATTACAGACTGGTTCATTACAGACTGGTTCATTACAGACTGGTTAATTACAGACTGGTTCATTACAGACTGTTGCAATGATGTCACTGAGAATCAAGGCTGCGACGCACTTGTGTAGTGTACAATATGAGGATTGTCCTCAACTAACCAACTGTCAATCAACGAGGGTGATCAACAACAATAAAACACTAACGTTATGTTGAACGCATCCCCAAAGACGGCATGGCTctaacctgatcccagatctgtttgttctcttGGCAACTTAACTTAttgctgtcattgtcaagccaaacatgttTTAGCGTGACAAGGAGTGACAAGTAGTTGGCATGATGGCACCAACAGACTGGTACTGCTTTGATCTAGTGGTTAATAATCCCTATTAATGTGAATACAGGCCCGAGGCCTGAGTAATTACATAAGGCACTACCTATTACCAGAGTGtgggcactagatagggaatagggttgccatttgggacgtaacccaGGTCTGGCATCTGTTGGTATGGATGAAGCACAATGATGTGGCTGTTGTTTAAACTCATGTTGGGAGaaaaaagatagaaagagagagtgagcgagagtgagcgagacagagagggagagagagagagagagagagagagagagagagagagagagagagagagtgagagagagagagagagagagagagagagagaaagtgtgtgagagagagagagagagagagcgagagagagaaagagacagacagagagagagagatagagaaagtgtgtgagagagcaagagaaagacagagagagagagagacagagagagagacagagagagagagagagacagagagagagagagagagagagagagagagagagagagagagacagagacagagagagagagagacagagcgttgCCCCTTGAAGTGGGCTTGGATGAATCTCCTCTATTCTGCCTTGTTATTTAATTTTACCGTCCATTAATTTATTCTATATTTTattctatatttatttatttacctctCTGTCGTTTTTTCTAAGATTGTTATAATGAAACTATAAGGGATGATACTAAAATGCTTCTTTATTTTTTGCTGAAGATAACAAGCTGTTTGAAATAACATTTgtgggcatat
>TU1944618
GTAGCAACAGTGCCACCCGGAGGTAGAAGGGAGCATAGCACGGTGCACGAGCGGAACTGCCGTGTGTGTGAATGAGGACATTTTGAAAATCATTCTTATACCTTGAAATAACGTGAGAAACAAAGCAATTTCATGTGTGACAATATTTTATATATAATTTAGGTCTCATCTTTCTTCATTCTGAATTAAACACGAGATTTGATCAGGGTGCTTCAAAAACCTCATTTTCTTCAAACGGGCTCTTCTAAGACGTCTGAACGCGCTGTCAGAGTTCCTATATGTTTGTCATTAACTCATTACATATCCTGAAGAAGTTCTATATAATAGTACATATGTATCAAGTAATATAATACAATGTCTAGACATTTTCTGAACAGTGTCTCCGAGAATAACATTGAAAATAGTATTATTGAAATAACTCGAAAGCATAAGAGGGGTGAGTTGCTATAAAACCCCATCGTCTTTATTGTCGTGTTGATTGTGGTAAATACTATTATAATATGAACTAACTATACCCGAAGATAAGTATTATGGGTGATGAAATGACCCTGCTGCGTTCCTGTCAGTGTAGCCTGTAGTATAATACTGGTTCCTGCATTCATTACAGACTGGTTCATTACAGACTGGTTCATTACAGACTGGTTAATTACAGACTGGTTCATTACAGACTGTTGCAATGATGTCACTGAGAATCAAGGCTGCGACGCACTTGTGTAGTGTACAATATGAGGATTGTCCTCAACTAACCAACTGTCAATCAACGAGGGTGATCAACAACAATAAAACACTAACGTTATGTTGAACGCATCCCCAAAGACGGCATGGCTctaacctgatcccagatctgtttgttctcttGGCAACTTAACTTAttgctgtcattgtcaagccaaacatgttTTAGCGTGACAAGGAGTGACAAGTAGTTGGCATGATGGCACCAACAGACTGGTACTGCTTTGATCTAGTGGTTAATAATCCCTATTAATGTGAATACAGGCCCGAGGCCTGAGTAATTACATAAGGCACTACCTATTACCAGAGTGtgggcactagatagggaatagggttgccatttgggacgtaacccaGGTCTGGCATCTGTTGGTATGGATGAAGCACAATGATGTGGCTGTTGTTTAAACTCATGTTGGGAGaaaaaagatagaaagagagagtgagcgagagtgagcgagacagagagggagagagagagagagagagagagagagagagagagagagagagagagagtgagagagagagagagagagagagagagagagaaagtgtgtgagagagagagagagagagagagagaaagtgtgtgagagagagagcgagagagagaaagagacagacagagagagagagatagagaaagtgtgtgagagagcaagagaaagacagagagagagagagacagagagagagacagagagagagagagagacagagagagagagagagagagacagagaaagtgtgtgtgagagagagagagagagagagagagacagagagagagagacagagagaaagagagagggggagagaaagagagagaaagagagagggggagagaaagagagagagagagagacagagagagagagagagagagagagagacagagacagagagagagagagacagagcgttgCCCCTTGAAGTGGGCTTGGATGAATCTCCTCTATTCTGCCTTGTTATTTAATTTTACCGTCCATTAATTTATTCTATATTTTattctatatttatttatttacctctCTGTCGTTTTTTCTAAGATTGTTATAATGAAACTATAAGGGATGATACTAAAATGCTTCTTTATTTTTTGCTGAAGATAACAAGCTGTTTGAAATAACATTTgtgggcatat
>TU1944619
GTAGCAACAGTGCCACCCGGAGGTAGAAGGGAGCATAGCACGGTGCACGAGCGGAACTGCCGTGTGTGTGAATGAGGACATTTTGAAAATCATTCTTATACCTTGAAATAACGTGAGAAACAAAGCAATTTCATGTGTGACAATATTTTATATATAATTTAGGTCTCATCTTTCTTCATTCTGAATTAAACACGAGATTTGATCAGGGTGCTTCAAAAACCTCATTTTCTTCAAACGGGCTCTTCTAAGACGTCTGAACGCGCTGTCAGAGTTCCTATATGTTTGTCATTAACTCATTACATATCCTGAAGAAGTTCTATATAATAGTACATATGTATCAAGTAATATAATACAATGTCTAGACATTTTCTGAACAGTGTCTCCGAGAATAACATTGAAAATAGTATTATTGAAATAACTCGAAAGCATAAGAGGGGTGAGTTGCTATAAAACCCCATCGTCTTTATTGTCGTGTTGATTGTGGTAAATACTATTATAATATGAACTAACTATACCCGAAGATAAGTATTATGGGTGATGAAATGACCCTGCTGCGTTCCTGTCAGTGTAGCCTGTAGTATAATACTGGTTCCTGCATTCATTACAGACTGGTTCATTACAGACTGGTTCATTACAGACTGGTTAATTACAGACTGGTTCATTACAGACTGTTGCAATGATGTCACTGAGAATCAAGGCTGCGACGCACTTGTGTAGTGTACAATATGAGGATTGTCCTCAACTAACCAACTGTCAATCAACGAGGGTGATCAACAACAATAAAACACTAACGTTATGTTGAACGCATCCCCAAAGACGGCATGGCTctaacctgatcccagatctgtttgttctcttGGCAACTTAACTTAttgctgtcattgtcaagccaaacatgttTTAGCGTGACAAGGAGTGACAAGTAGTTGGCATGATGGCACCAACAGACTGGTACTGCTTTGATCTAGTGGTTAATAATCCCTATTAATGTGAATACAGGCCCGAGGCCTGAGTAATTACATAAGGCACTACCTATTACCAGAGTGtgggcactagatagggaatagggttgccatttgggacgtaacccaGGTCTGGCATCTGTTGGTATGGATGAAGCACAATGATGTGGCTGTTGTTTAAACTCATGTTGGGAGaaaaaagatagaaagagagagtgagcgagagtgagcgagacagagagggagagagagagagagagagagagagagagagagagagagagagagagagtgagagagagagagagagagagagagagagagaaagtgtgtgagagagagagagagagagagagagaaagtgtgtgagagagagagcgagagagagaaagagacagacagagagagagagatagagaaagtgtgtgagagagcaagagaaagacagagagagagagagacagagagagagacagagagagagagagagacagagagagagagagagagagagagagagagagagagagagagagagacagagggagacagagagagagacagagagagagagagagagagacagagagagagagacagagagaaagagagagggggagagaaagagagagaaagagagagggggagagaaagagagagagagagagacagagagagagagagagagagagagagacagagacagagagagagagagacagagcgttgCCCCTTGAAGTGGGCTTGGATGAATCTCCTCTATTCTGCCTTGTTATTTAATTTTACCGTCCATTAATTTATTCTATATTTTattctatatttatttatttacctctCTGTCGTTTTTTCTAAGATTGTTATAATGAAACTATAAGGGATGATACTAAAATGCTTCTTTATTTTTTGCTGAAGATAACAAGCTGTTTGAAATAACATTTgtgggcatat
>TU1944620
GTAGCAACAGTGCCACCCGGAGGTAGAAGGGAGCATAGCACGGTGCACGAGCGGAACTGCCGTGTGTGTGAATGAGGACATTTTGAAAATCATTCTTATACCTTGAAATAACGTGAGAAACAAAGCAATTTCATGTGTGACAATATTTTATATATAATTTAGGTCTCATCTTTCTTCATTCTGAATTAAACACGAGATTTGATCAGGGTGCTTCAAAAACCTCATTTTCTTCAAACGGGCTCTTCTAAGACGTCTGAACGCGCTGTCAGAGTTCCTATATGTTTGTCATTAACTCATTACATATCCTGAAGAAGTTCTATATAATAGTACATATGTATCAAGTAATATAATACAATGTCTAGACATTTTCTGAACAGTGTCTCCGAGAATAACATTGAAAATAGTATTATTGAAATAACTCGAAAGCATAAGAGGGGTGAGTTGCTATAAAACCCCATCGTCTTTATTGTCGTGTTGATTGTGGTAAATACTATTATAATATGAACTAACTATACCCGAAGATAAGTATTATGGGTGATGAAATGACCCTGCTGCGTTCCTGTCAGTGTAGCCTGTAGTATAATACTGGTTCCTGCATTCATTACAGACTGGTTCATTACAGACTGGTTCATTACAGACTGGTTAATTACAGACTGGTTCATTACAGACTGTTGCAATGATGTCACTGAGAATCAAGGCTGCGACGCACTTGTGTAGTGTACAATATGAGGATTGTCCTCAACTAACCAACTGTCAATCAACGAGGGTGATCAACAACAATAAAACACTAACGTTATGTTGAACGCATCCCCAAAGACGGCATGGCTctaacctgatcccagatctgtttgttctcttGGCAACTTAACTTAttgctgtcattgtcaagccaaacatgttTTAGCGTGACAAGGAGTGACAAGTAGTTGGCATGATGGCACCAACAGACTGGTACTGCTTTGATCTAGTGGTTAATAATCCCTATTAATGTGAATACAGGCCCGAGGCCTGAGTAATTACATAAGGCACTACCTATTACCAGAGTGtgggcactagatagggaatagggttgccatttgggacgtaacccaGGTCTGGCATCTGTTGGTATGGATGAAGCACAATGATGTGGCTGTTGTTTAAACTCATGTTGGGAGaaaaaagatagaaagagagagtgagcgagagtgagcgagacagagagggagagagagagagagagagagagagagagagtgagagagagagagagagagagagagagagagagagagagagag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1944621 False 272 lncRNA 0.51 3 626754 778190
TU1944615 False 1814 lncRNA 0.41 2 711710 713749
TU1944617 False 1724 lncRNA 0.40 3 711710 713749
TU1944618 False 1882 lncRNA 0.41 2 711710 713749
TU1944619 False 1910 lncRNA 0.41 2 711710 713749
TU1944620 True 1280 lncRNA 0.41 2 711710 778145

Neighbor

gene id symbol gene type direction distance location
LOC101268929 LOC101268929 coding upstream 60432 479755 ~ 566322 (+)
LOC118942821 wnt5b coding upstream 162180 225129 ~ 464574 (+)
LOC118942820 LOC108442871 coding upstream 432536 60262 ~ 194218 (+)
LOC118942824 LOC106609805 coding downstream 74841 853031 ~ 999564 (+)
LOC110518351 LOC103459268 coding downstream 378524 1156714 ~ 1305903 (+)
LOC110499702 tcpb coding downstream 698690 1476880 ~ 1487165 (+)
LOC118943024 NA coding downstream 705837 1484027 ~ 1484168 (+)
LOC110499710 LOC106596118 coding downstream 711503 1489693 ~ 1500056 (+)
G1699462 NA non-coding upstream 37366 585991 ~ 589388 (+)
G1699455 NA non-coding upstream 40957 548316 ~ 585797 (+)
G1699456 NA non-coding upstream 67053 556730 ~ 559701 (+)
G1699452 NA non-coding upstream 82773 543265 ~ 543981 (+)
G1699523 NA non-coding downstream 1582 779772 ~ 781362 (+)
G1699532 NA non-coding downstream 22459 800649 ~ 802742 (+)
G1699534 NA non-coding downstream 30844 809034 ~ 809603 (+)
G1699539 NA non-coding downstream 42815 821005 ~ 821238 (+)
G1699565 NA non-coding downstream 90180 868370 ~ 929611 (+)
G1699629 NA other downstream 304501 1082691 ~ 1086026 (+)
G1699655 NA other downstream 315959 1094149 ~ 1100221 (+)
G1699724 LOC106592130 other downstream 564309 1342499 ~ 1343138 (+)
G1699804 NA other downstream 759766 1537956 ~ 1538880 (+)

Expression


Co-expression Network