G1699510


Basic Information

Item Value
gene id G1699510
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 728434 ~ 729118 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1944682
aagttgagccaatggccatgaggtaaattgagccaatggccatgaggtaagttgagccaatggccatgaggtaaattgagccaatggccatgaggtaagttgagccaatggccatgaggtaagttgagccaatgtaagtgttttcttcccaggcgtaATGCAAGGTACTATctctgggatatgaggtaacaacagggcctgggTTAAAAGTGATTACAAATcacaaagtgtttgttaggtaTGAAGCCTGTGTTAAAAGAGCCATAAAAAGACCCCCCAAAAAAAGCAATTGTGACGAATTGTGTTTAAGAAATAAAGATAAGACATGGTTTTAAAATGGTAGTGGTAATATTCTGTACAGACATTTGTAGGtggcttaatttaccctgtcctGCAGACAAGATATGTTTACTGTAACTTTACTTTCCTATgacagagtgatgctgaatgtaaagaATGTCTCAtcttaccccactctcctctactgTATTGGACAACCTAGATGCCCtgaccagaggaggctgctgaggggaggacgactcataataatggctggaaggagcgaatggaatggcctcaaacacatg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1944682 True 587 lncRNA 0.42 2 728434 729118

Neighbor

gene id symbol gene type direction distance location
LOC118936449 LOC106575063 coding upstream 18434 647909 ~ 710000 (+)
LOC101268929 LOC101268929 coding upstream 162112 479755 ~ 566322 (+)
LOC118942821 wnt5b coding upstream 263860 225129 ~ 464574 (+)
LOC118942820 LOC108442871 coding upstream 534216 60262 ~ 194218 (+)
LOC118942824 LOC106609805 coding downstream 123913 853031 ~ 999564 (+)
LOC110518351 LOC103459268 coding downstream 427596 1156714 ~ 1305903 (+)
LOC110499702 tcpb coding downstream 747762 1476880 ~ 1487165 (+)
LOC118943024 NA coding downstream 754909 1484027 ~ 1484168 (+)
LOC110499710 LOC106596118 coding downstream 760575 1489693 ~ 1500056 (+)
G1699488 NA non-coding upstream 54239 671084 ~ 674195 (+)
G1699462 NA non-coding upstream 139046 585991 ~ 589388 (+)
G1699455 NA non-coding upstream 142637 548316 ~ 585797 (+)
G1699456 NA non-coding upstream 168733 556730 ~ 559701 (+)
G1699513 NA non-coding downstream 8949 738067 ~ 743248 (+)
G1699523 NA non-coding downstream 50654 779772 ~ 781362 (+)
G1699532 NA non-coding downstream 71531 800649 ~ 802742 (+)
G1699534 NA non-coding downstream 79916 809034 ~ 809603 (+)
G1699539 NA non-coding downstream 91887 821005 ~ 821238 (+)
G1699629 NA other downstream 353573 1082691 ~ 1086026 (+)
G1699655 NA other downstream 365031 1094149 ~ 1100221 (+)
G1699724 LOC106592130 other downstream 613381 1342499 ~ 1343138 (+)
G1699804 NA other downstream 808838 1537956 ~ 1538880 (+)

Expression


Co-expression Network