G1699523


Basic Information

Item Value
gene id G1699523
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 779772 ~ 781362 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1944697
aaatcACAGAGTTACTGTAGTCTGactgatgaggagagagaaatcACATAGTTACTGTAGTCAGactgatgaggagagagaaatcACAGAGTTACTGTAGTCTGACTGATGAGGATAGAGAAATCATAGAGTTACTGTAGTCTGactgatgaggagagagaaatcACAGAGTTACTGTAGTCTGACTAATGAGGAGAGAGAAATCACAGAGTTACTGTAGTCAGactgatgaggagagagaaaacacagagtTACTGTAGTCTGactgatgaggagagagaaatcACAGAGTTACTGTAGTCTGactgatgaggagagagaaatcACAGAGTTACTGTAGTCTGACTGACGAGGAGAGAGAAATCACAGAGTTACTGTAGTCTGactgatgaggagagagaaatcACAGAGTTACTGTAGTCAGactgatgaggagagagaaatcACAGAGTTACTGTAGTCAGactgatgaggagagagaaatcACAGAGTTACTGTAGTCAGACTGATGAGGAGATAGAAATCACAGAGTTACTGCAACAGAGAtcataggaagagagaaggtcaaactgcaacagagatcataggaagagagaaggtcaAACTGCAACAGAGATCATAGGAAGAGAAGGTCAAACTGCAACAGAGAtcataggaagagagaaggtcaaactgcaacagagatcataggaagagaaggtcaaactacaacagagatcataggaagagagaaggtcaaactgcaacagagatcataggaagagagaaggtcaaactgcaacagagatcataggaagagagaaggtcaaactacaacagagatcataggaagagaaggtcaaactacaacagagatcataggaagagagaaggtcaAACTGCAACAGAGATCATAGGAAGAGAAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1944697 True 905 lncRNA 0.42 2 779772 781362

Neighbor

gene id symbol gene type direction distance location
LOC118936449 LOC106575063 coding upstream 69772 647909 ~ 710000 (+)
LOC101268929 LOC101268929 coding upstream 213450 479755 ~ 566322 (+)
LOC118942821 wnt5b coding upstream 315198 225129 ~ 464574 (+)
LOC118942820 LOC108442871 coding upstream 585554 60262 ~ 194218 (+)
LOC118942824 LOC106609805 coding downstream 71669 853031 ~ 999564 (+)
LOC110518351 LOC103459268 coding downstream 375352 1156714 ~ 1305903 (+)
LOC110499702 tcpb coding downstream 695518 1476880 ~ 1487165 (+)
LOC118943024 NA coding downstream 702665 1484027 ~ 1484168 (+)
LOC110499710 LOC106596118 coding downstream 708331 1489693 ~ 1500056 (+)
G1699463 NA non-coding upstream 1582 626754 ~ 778190 (+)
G1699513 NA non-coding upstream 36524 738067 ~ 743248 (+)
G1699510 NA non-coding upstream 50654 728434 ~ 729118 (+)
G1699488 NA non-coding upstream 105577 671084 ~ 674195 (+)
G1699462 NA non-coding upstream 190384 585991 ~ 589388 (+)
G1699532 NA non-coding downstream 19287 800649 ~ 802742 (+)
G1699534 NA non-coding downstream 27672 809034 ~ 809603 (+)
G1699539 NA non-coding downstream 39643 821005 ~ 821238 (+)
G1699565 NA non-coding downstream 87008 868370 ~ 929611 (+)
G1699568 NA non-coding downstream 91715 873077 ~ 879296 (+)
G1699629 NA other downstream 301329 1082691 ~ 1086026 (+)
G1699655 NA other downstream 312787 1094149 ~ 1100221 (+)
G1699724 LOC106592130 other downstream 561137 1342499 ~ 1343138 (+)
G1699804 NA other downstream 756594 1537956 ~ 1538880 (+)

Expression


Co-expression Network