Gene
RNA
| Item | Value |
|---|---|
| gene id | G1699532 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048585.1 |
| NCBI id | CM023239.2 |
| chromosome length | 64935962 |
| location | 800649 ~ 802742 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1944707 | False | 261 | lncRNA | 0.45 | 3 | 800649 | 802742 |
| TU1944708 | True | 224 | lncRNA | 0.46 | 2 | 802062 | 802742 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118936449 | LOC106575063 | coding | upstream | 90649 | 647909 ~ 710000 (+) |
| LOC101268929 | LOC101268929 | coding | upstream | 234327 | 479755 ~ 566322 (+) |
| LOC118942821 | wnt5b | coding | upstream | 336075 | 225129 ~ 464574 (+) |
| LOC118942820 | LOC108442871 | coding | upstream | 606431 | 60262 ~ 194218 (+) |
| LOC118942824 | LOC106609805 | coding | downstream | 50289 | 853031 ~ 999564 (+) |
| LOC110518351 | LOC103459268 | coding | downstream | 353972 | 1156714 ~ 1305903 (+) |
| LOC110499702 | tcpb | coding | downstream | 674138 | 1476880 ~ 1487165 (+) |
| LOC118943024 | NA | coding | downstream | 681285 | 1484027 ~ 1484168 (+) |
| LOC110499710 | LOC106596118 | coding | downstream | 686951 | 1489693 ~ 1500056 (+) |
| G1699523 | NA | non-coding | upstream | 19287 | 779772 ~ 781362 (+) |
| G1699463 | NA | non-coding | upstream | 22459 | 626754 ~ 778190 (+) |
| G1699513 | NA | non-coding | upstream | 57401 | 738067 ~ 743248 (+) |
| G1699510 | NA | non-coding | upstream | 71531 | 728434 ~ 729118 (+) |
| G1699488 | NA | non-coding | upstream | 126454 | 671084 ~ 674195 (+) |
| G1699534 | NA | non-coding | downstream | 6292 | 809034 ~ 809603 (+) |
| G1699539 | NA | non-coding | downstream | 18263 | 821005 ~ 821238 (+) |
| G1699565 | NA | non-coding | downstream | 65628 | 868370 ~ 929611 (+) |
| G1699568 | NA | non-coding | downstream | 70335 | 873077 ~ 879296 (+) |
| G1699577 | NA | non-coding | downstream | 89493 | 892235 ~ 893040 (+) |
| G1699629 | NA | other | downstream | 279949 | 1082691 ~ 1086026 (+) |
| G1699655 | NA | other | downstream | 291407 | 1094149 ~ 1100221 (+) |
| G1699724 | LOC106592130 | other | downstream | 539757 | 1342499 ~ 1343138 (+) |
| G1699804 | NA | other | downstream | 735214 | 1537956 ~ 1538880 (+) |
