G1699565



Basic Information


Item Value
gene id G1699565
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 868370 ~ 929611 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU1944791
ctctctctgtctctctctctctctctgtctctgtctctctctctctctctgtctctctctctgtctctctctctgtctctctctctgtctctctctctgtctctctctgtctctctctctgtctctctctgtctctctctctgtctctctctgtctctctctctgtctctctctctgtctctctctgtctctctctctgtctctctc

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU1944791 True 207 lncRNA 0.50 2 868370 929611

Neighbor


gene id symbol gene type direction distance location
LOC118936449 LOC106575063 coding upstream 158370 647909 ~ 710000 (+)
LOC101268929 LOC101268929 coding upstream 302048 479755 ~ 566322 (+)
LOC118942821 wnt5b coding upstream 403796 225129 ~ 464574 (+)
LOC118942820 LOC108442871 coding upstream 674152 60262 ~ 194218 (+)
LOC110518351 LOC103459268 coding downstream 227103 1156714 ~ 1305903 (+)
LOC110499702 tcpb coding downstream 547269 1476880 ~ 1487165 (+)
LOC118943024 NA coding downstream 554416 1484027 ~ 1484168 (+)
LOC110499710 LOC106596118 coding downstream 560082 1489693 ~ 1500056 (+)
LOC110517600 rab3ip coding downstream 587751 1517362 ~ 1600082 (+)
G1699539 NA non-coding upstream 47132 821005 ~ 821238 (+)
G1699534 NA non-coding upstream 58767 809034 ~ 809603 (+)
G1699532 NA non-coding upstream 65628 800649 ~ 802742 (+)
G1699523 NA non-coding upstream 87008 779772 ~ 781362 (+)
G1699513 NA non-coding upstream 125122 738067 ~ 743248 (+)
G1699593 NA non-coding downstream 3336 932947 ~ 934038 (+)
G1699601 NA non-coding downstream 21276 950887 ~ 951687 (+)
G1699615 NA non-coding downstream 51895 981506 ~ 982356 (+)
G1699616 NA non-coding downstream 53382 982993 ~ 983249 (+)
G1699625 NA non-coding downstream 86529 1016140 ~ 1016467 (+)
G1699629 NA other downstream 153080 1082691 ~ 1086026 (+)
G1699655 NA other downstream 164538 1094149 ~ 1100221 (+)
G1699724 LOC106592130 other downstream 412888 1342499 ~ 1343138 (+)
G1699804 NA other downstream 608345 1537956 ~ 1538880 (+)

Expression



Co-expression Network