G1699568


Basic Information

Item Value
gene id G1699568
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 873077 ~ 879296 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1944794
ggtttattctactctcactaacactactatgggtttattctactctcactaacactactatgggtttattctactctcactaacactactatgggtttattctactctcactaacactactatgggtttattctactctcactaacattactatgggtttattctactctcactaacactactatgggtttattctactcactaacactactatgggtttattctactctcactaacattactatgggtttattctactctcactaacactactatgggtttattctactctcactaacactactatgggtttattctactctcactaacactactatgggtttattctactctcactaacattactatgggtttattctactctcactaacactactatgggtttattctactcactaacactactatgggtttattctactctcactaacattactatgggtttattctactctcactaacactactatgggttattctactctcactaaacctctccataacactactatgggtttattctactctcactaaacctctccataacattactatgggtttattctactctcactaaacctctccatgacatTTCTCACAAATACTTGAGATCATAATTGATAATCAGCCTGTCAAATGTTTTTTCGTAAATCGACTTCCATATTTAATGTGAGATGTACATCACCTTTCTACCTGAGCACAGTTTCTCCAGCTCCACCcatcagctgtttaccaaaaacaagtTGCAGAGTGACCGTTGTTTTTCTTCACCTAGATTATTCCTTTAAGTGAAATGATTCCCACTAAATCACCTTCCAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1944794 True 840 lncRNA 0.36 3 873077 879296

Neighbor

gene id symbol gene type direction distance location
LOC118936449 LOC106575063 coding upstream 163077 647909 ~ 710000 (+)
LOC101268929 LOC101268929 coding upstream 306755 479755 ~ 566322 (+)
LOC118942821 wnt5b coding upstream 408503 225129 ~ 464574 (+)
LOC118942820 LOC108442871 coding upstream 678859 60262 ~ 194218 (+)
LOC110518351 LOC103459268 coding downstream 277418 1156714 ~ 1305903 (+)
LOC110499702 tcpb coding downstream 597584 1476880 ~ 1487165 (+)
LOC118943024 NA coding downstream 604731 1484027 ~ 1484168 (+)
LOC110499710 LOC106596118 coding downstream 610397 1489693 ~ 1500056 (+)
LOC110517600 rab3ip coding downstream 638066 1517362 ~ 1600082 (+)
G1699539 NA non-coding upstream 51839 821005 ~ 821238 (+)
G1699534 NA non-coding upstream 63474 809034 ~ 809603 (+)
G1699532 NA non-coding upstream 70335 800649 ~ 802742 (+)
G1699523 NA non-coding upstream 91715 779772 ~ 781362 (+)
G1699513 NA non-coding upstream 129829 738067 ~ 743248 (+)
G1699577 NA non-coding downstream 12939 892235 ~ 893040 (+)
G1699593 NA non-coding downstream 53651 932947 ~ 934038 (+)
G1699601 NA non-coding downstream 71591 950887 ~ 951687 (+)
G1699615 NA non-coding downstream 102210 981506 ~ 982356 (+)
G1699616 NA non-coding downstream 103697 982993 ~ 983249 (+)
G1699629 NA other downstream 203395 1082691 ~ 1086026 (+)
G1699655 NA other downstream 214853 1094149 ~ 1100221 (+)
G1699724 LOC106592130 other downstream 463203 1342499 ~ 1343138 (+)
G1699804 NA other downstream 658660 1537956 ~ 1538880 (+)

Expression


Co-expression Network