G1699577


Basic Information

Item Value
gene id G1699577
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 892235 ~ 893040 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1944806
TACGGGGAGTTAAATCTATGGAGTTATCCACAGATATGGGAGGGGCTTCATTGCCATATTTCCCAGTATGCTCTGGTAcaggtagatttaaaaaaaaaaatggtttgttacaatatctgtgtttttccatgtacatttgtttttgatattgtttctaaactaatccaatctctAAGTGGTTGGATTTATAGCAACTGTTAGTGAAGATAGTTGTTCCAGTTTACATTCTAGATAAGACTTTATATTCTGTATTTTGCTCTAGAATGCTGTATTCTAGAATGTTGTAATATTTGGTTACAGGAGGAAAACACTCTTACTGTGTATACTGGAGGTATTCTAGACACTCTTACTGGGTATACTGGAGGTATTCTAGACACTCTTACTGTGTATACTGGAGGTATTCTAGACACTCTTACTGTGTATACTGGAGGTATTCTAGACACTCTTACTGTGTATACTGGAGGTATTCTAGACACTCTTACTGTGTATACTGGAGGTATTCTAGACACTCTTACTGTGTATACTGGAGGTATTCTAGACACTCTTACTGTGTATACTGGAGGTATTCTAGAACACACATTCTGGAGTGCAGCCCAAACTCTTCAGATCAGATCTGTTTCAGATCTTAGTTTAAACAACAAGATCCTGCTGTGATTGTAACAGgctgtcacatacacacacataaatacacacaaacacacatatac

Function

NR:

description
PREDICTED: apolipoprotein A-IV-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1944806 True 707 lncRNA 0.37 4 892235 893040

Neighbor

gene id symbol gene type direction distance location
LOC118936449 LOC106575063 coding upstream 182235 647909 ~ 710000 (+)
LOC101268929 LOC101268929 coding upstream 325913 479755 ~ 566322 (+)
LOC118942821 wnt5b coding upstream 427661 225129 ~ 464574 (+)
LOC118942820 LOC108442871 coding upstream 698017 60262 ~ 194218 (+)
LOC110518351 LOC103459268 coding downstream 263674 1156714 ~ 1305903 (+)
LOC110499702 tcpb coding downstream 583840 1476880 ~ 1487165 (+)
LOC118943024 NA coding downstream 590987 1484027 ~ 1484168 (+)
LOC110499710 LOC106596118 coding downstream 596653 1489693 ~ 1500056 (+)
LOC110517600 rab3ip coding downstream 624322 1517362 ~ 1600082 (+)
G1699568 NA non-coding upstream 12939 873077 ~ 879296 (+)
G1699539 NA non-coding upstream 70997 821005 ~ 821238 (+)
G1699534 NA non-coding upstream 82632 809034 ~ 809603 (+)
G1699532 NA non-coding upstream 89493 800649 ~ 802742 (+)
G1699523 NA non-coding upstream 110873 779772 ~ 781362 (+)
G1699593 NA non-coding downstream 39907 932947 ~ 934038 (+)
G1699601 NA non-coding downstream 57847 950887 ~ 951687 (+)
G1699615 NA non-coding downstream 88466 981506 ~ 982356 (+)
G1699616 NA non-coding downstream 89953 982993 ~ 983249 (+)
G1699625 NA non-coding downstream 123100 1016140 ~ 1016467 (+)
G1699629 NA other downstream 189651 1082691 ~ 1086026 (+)
G1699655 NA other downstream 201109 1094149 ~ 1100221 (+)
G1699724 LOC106592130 other downstream 449459 1342499 ~ 1343138 (+)
G1699804 NA other downstream 644916 1537956 ~ 1538880 (+)

Expression


Co-expression Network