Gene
RNA
| Item | Value |
|---|---|
| gene id | G1700534 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048585.1 |
| NCBI id | CM023239.2 |
| chromosome length | 64935962 |
| location | 899771 ~ 900130 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1946058 | True | 234 | lncRNA | 0.44 | 2 | 899771 | 900130 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110516566 | LOC106576623 | coding | downstream | 48005 | 824590 ~ 851766 (-) |
| cacna2d4a | cacna2d4 | coding | downstream | 114397 | 585735 ~ 785374 (-) |
| LOC118942823 | NA | coding | downstream | 316754 | 581374 ~ 597675 (-) |
| LOC110517722 | LOC106590767 | coding | downstream | 550786 | 345973 ~ 348985 (-) |
| LOC118942822 | NA | coding | downstream | 634136 | 261114 ~ 265635 (-) |
| LOC110511372 | LOC106592130 | coding | upstream | 419091 | 1319221 ~ 1348497 (-) |
| LOC110527029 | LOC106592131 | coding | upstream | 448469 | 1348599 ~ 1357031 (-) |
| LOC118942825 | frs2 | coding | upstream | 463099 | 1363229 ~ 1446417 (-) |
| LOC110499705 | LOC106609801 | coding | upstream | 548674 | 1448804 ~ 1453886 (-) |
| LOC110499704 | cpsf6 | coding | upstream | 554436 | 1454566 ~ 1513068 (-) |
| G1700522 | NA | non-coding | downstream | 21469 | 875044 ~ 878302 (-) |
| G1700500 | NA | non-coding | downstream | 67227 | 832019 ~ 832544 (-) |
| G1700482 | NA | non-coding | downstream | 101408 | 789228 ~ 798363 (-) |
| G1700463 | NA | non-coding | downstream | 178295 | 721156 ~ 721476 (-) |
| G1700572 | NA | non-coding | upstream | 81388 | 981518 ~ 982350 (-) |
| G1700582 | NA | non-coding | upstream | 117199 | 1017329 ~ 1018993 (-) |
| G1700583 | NA | non-coding | upstream | 119540 | 1019670 ~ 1021731 (-) |
| G1700584 | NA | non-coding | upstream | 121786 | 1021916 ~ 1024151 (-) |
| G1700569 | NA | non-coding | upstream | 133552 | 1033682 ~ 1034400 (-) |
| G1700312 | NA | other | downstream | 545262 | 352487 ~ 354509 (-) |
| LOC110512520 | LOC106609724 | other | upstream | 1222399 | 2113042 ~ 2128710 (-) |
| G1701041 | NA | other | upstream | 1288303 | 2188433 ~ 2189666 (-) |
| G1701824 | NA | other | upstream | 1672544 | 2572603 ~ 2577051 (-) |
