Gene
RNA
| Item | Value |
|---|---|
| gene id | G1700572 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048585.1 |
| NCBI id | CM023239.2 |
| chromosome length | 64935962 |
| location | 981518 ~ 982350 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: translation initiation factor IF-2-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1946102 | True | 441 | lncRNA | 0.31 | 2 | 981518 | 982350 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110516566 | LOC106576623 | coding | downstream | 129752 | 824590 ~ 851766 (-) |
| cacna2d4a | cacna2d4 | coding | downstream | 196144 | 585735 ~ 785374 (-) |
| LOC118942823 | NA | coding | downstream | 398501 | 581374 ~ 597675 (-) |
| LOC110517722 | LOC106590767 | coding | downstream | 632533 | 345973 ~ 348985 (-) |
| LOC118942822 | NA | coding | downstream | 715883 | 261114 ~ 265635 (-) |
| LOC110511372 | LOC106592130 | coding | upstream | 336871 | 1319221 ~ 1348497 (-) |
| LOC110527029 | LOC106592131 | coding | upstream | 366249 | 1348599 ~ 1357031 (-) |
| LOC118942825 | frs2 | coding | upstream | 380879 | 1363229 ~ 1446417 (-) |
| LOC110499705 | LOC106609801 | coding | upstream | 466454 | 1448804 ~ 1453886 (-) |
| LOC110499704 | cpsf6 | coding | upstream | 472216 | 1454566 ~ 1513068 (-) |
| G1700534 | NA | non-coding | downstream | 81388 | 899771 ~ 900130 (-) |
| G1700522 | NA | non-coding | downstream | 103216 | 875044 ~ 878302 (-) |
| G1700500 | NA | non-coding | downstream | 148974 | 832019 ~ 832544 (-) |
| G1700482 | NA | non-coding | downstream | 183155 | 789228 ~ 798363 (-) |
| G1700582 | NA | non-coding | upstream | 34979 | 1017329 ~ 1018993 (-) |
| G1700583 | NA | non-coding | upstream | 37320 | 1019670 ~ 1021731 (-) |
| G1700584 | NA | non-coding | upstream | 39566 | 1021916 ~ 1024151 (-) |
| G1700569 | NA | non-coding | upstream | 51332 | 1033682 ~ 1034400 (-) |
| G1700610 | NA | non-coding | upstream | 107498 | 1089848 ~ 1090221 (-) |
| G1700312 | NA | other | downstream | 627009 | 352487 ~ 354509 (-) |
| LOC110512520 | LOC106609724 | other | upstream | 1140179 | 2113042 ~ 2128710 (-) |
| G1701041 | NA | other | upstream | 1206083 | 2188433 ~ 2189666 (-) |
| G1701824 | NA | other | upstream | 1590324 | 2572603 ~ 2577051 (-) |
