G1699625


Basic Information

Item Value
gene id G1699625
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 1016140 ~ 1016467 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1944872
CATTTCACTTCAAATGACttgagagggaaacagagagagagagactgagagagacagacagagagtttaCACATTTCACTTCAAATGACTTGAGCAAGTTTATTTGTAATGGCATGTGGAGACAGTGCCAGGCATCGAGCAggacctctccctccATCTCCCCTCAATCTCCCCCACATCTCCCCTCAATCTCCCCTCAATCTCCCCc

Function

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU1944872 True 208 lncRNA 0.49 2 1016140 1016467

Neighbor

gene id symbol gene type direction distance location
LOC118942824 LOC106609805 coding upstream 16576 853031 ~ 999564 (+)
LOC118936449 LOC106575063 coding upstream 306140 647909 ~ 710000 (+)
LOC101268929 LOC101268929 coding upstream 449818 479755 ~ 566322 (+)
LOC118942821 wnt5b coding upstream 551566 225129 ~ 464574 (+)
LOC118942820 LOC108442871 coding upstream 821922 60262 ~ 194218 (+)
LOC110518351 LOC103459268 coding downstream 140247 1156714 ~ 1305903 (+)
LOC110499702 tcpb coding downstream 460413 1476880 ~ 1487165 (+)
LOC118943024 NA coding downstream 467560 1484027 ~ 1484168 (+)
LOC110499710 LOC106596118 coding downstream 473226 1489693 ~ 1500056 (+)
LOC110517600 rab3ip coding downstream 500895 1517362 ~ 1600082 (+)
G1699616 NA non-coding upstream 32891 982993 ~ 983249 (+)
G1699615 NA non-coding upstream 33784 981506 ~ 982356 (+)
G1699601 NA non-coding upstream 64453 950887 ~ 951687 (+)
G1699593 NA non-coding upstream 82102 932947 ~ 934038 (+)
G1699577 NA non-coding upstream 123100 892235 ~ 893040 (+)
G1699632 NA non-coding downstream 30992 1047459 ~ 1048172 (+)
G1699643 NA non-coding downstream 48209 1064676 ~ 1068643 (+)
G1699652 NA non-coding downstream 70596 1087063 ~ 1087617 (+)
G1699659 NA non-coding downstream 85459 1101926 ~ 1124073 (+)
G1699693 NA non-coding downstream 188621 1205088 ~ 1206831 (+)
G1699629 NA other downstream 66224 1082691 ~ 1086026 (+)
G1699655 NA other downstream 77682 1094149 ~ 1100221 (+)
G1699724 LOC106592130 other downstream 326032 1342499 ~ 1343138 (+)
G1699804 NA other downstream 521489 1537956 ~ 1538880 (+)

Expression


Co-expression Network