G1700583


Basic Information

Item Value
gene id G1700583
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 1019670 ~ 1021731 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1946118
GTACCCATGTATTGTTGAGGTCCTGCTGCCCTGTATGTCCACTGACACTGTTAAACAGATGTCCCTTTTATAGCCTCCCTGTTCCCTGGGCGATGAAGACCTAGTTACTGTTAGACAGCAGAACATCCACAAATAGAGCTTGAATACACTCTATATCGTTTTTTAAAGATACCTAATACAAAATATGCCGTTGTTGCCTAAATATGCTTTAGATTATAATGCAGGTGTAAAAGTGAGAAAGGTTTTGGTTTCCATGACAATCACAGGTGTTATCAGAGGGCTGTAGGACGACAGCCTCCACTATAATGGAGAACAGCATCTGGTGTGGCTGGAATACGCCTCTATAATCCTCTGGGATCCATCTGGTGTGGCTGGAATACAGCTCTTAAATCCTCTGGGATCCATCTGGTGTGGCTGGAATACGGCTCTATAATCCTCTAGGATCCATCTGGTGTGGCTGGAATACGGCTCTTAAATCCTCTAGGATCCATCTGGTGTGGCTGGGATACGCCTCTATAATCCTCTAGGATCCATCTGGTGTGGCTGGGATACGCCTCTTAAATCCTCTAGGATCCATCTGGTGTGGCTGGAATACTGCTCTTAAATCCTCTAGGATCCATCTGGTGTGGCTGGGATACTCCTCTTAAATCCTCTAGGATCCATCTGGTGTGGCTGGAATACGGCTCTATAATCCTCTAGGATCCATCTGGTGTGGCTGGAATACGGCTCTTAAATCCTCTAGGATCCATCTGGTGTGGCTGGAATACGGCTCTATAATCCTCTGAGATCCATCTGGTGTGGCTGGAATACGGCTCTATAATCCTCTAGGATCCATCTGGTGTGGCTGGAATACGGCTCTTAAATCCTCTAGGATCCATCTGGTGTGGCTGGAATACGGCTCTTAAATCCTCTGGGATCCATCTGGTGTGGCTGGAATACAGCTCTTAAATCCTCTGGGATCCATCTGGTGTGGCTGGAATACAGCTCTATAATCCTCTAGGATCCATCTGGTGTGTCTGAGATACGCCTCTTAAATCCTCTAGAATCCATCTGGTGTGGCTGGAATACAGCTCTTAAATCCTCTGGGATCCATCTGGTGTGGCTGGAATACGGCTCTATAATCCTCTAGAATCCATCTGGTGTGGCTGGAATACAGCTCTTAAATCCTCTAGGATCCATCTGGTGTGGCTGGAATACAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1946118 True 1199 lncRNA 0.47 2 1019670 1021731

Neighbor

gene id symbol gene type direction distance location
LOC110516566 LOC106576623 coding downstream 167904 824590 ~ 851766 (-)
cacna2d4a cacna2d4 coding downstream 234296 585735 ~ 785374 (-)
LOC118942823 NA coding downstream 436653 581374 ~ 597675 (-)
LOC110517722 LOC106590767 coding downstream 670685 345973 ~ 348985 (-)
LOC118942822 NA coding downstream 754035 261114 ~ 265635 (-)
LOC110511372 LOC106592130 coding upstream 297490 1319221 ~ 1348497 (-)
LOC110527029 LOC106592131 coding upstream 326868 1348599 ~ 1357031 (-)
LOC118942825 frs2 coding upstream 341498 1363229 ~ 1446417 (-)
LOC110499705 LOC106609801 coding upstream 427073 1448804 ~ 1453886 (-)
LOC110499704 cpsf6 coding upstream 432835 1454566 ~ 1513068 (-)
G1700582 NA non-coding downstream 677 1017329 ~ 1018993 (-)
G1700572 NA non-coding downstream 37320 981518 ~ 982350 (-)
G1700534 NA non-coding downstream 119540 899771 ~ 900130 (-)
G1700522 NA non-coding downstream 141368 875044 ~ 878302 (-)
G1700584 NA non-coding upstream 185 1021916 ~ 1024151 (-)
G1700569 NA non-coding upstream 11951 1033682 ~ 1034400 (-)
G1700610 NA non-coding upstream 68117 1089848 ~ 1090221 (-)
G1700612 NA non-coding upstream 76516 1098247 ~ 1103848 (-)
G1700621 NA non-coding upstream 102843 1124574 ~ 1137671 (-)
G1700312 NA other downstream 665161 352487 ~ 354509 (-)
LOC110512520 LOC106609724 other upstream 1100798 2113042 ~ 2128710 (-)
G1701041 NA other upstream 1166702 2188433 ~ 2189666 (-)
G1701824 NA other upstream 1550943 2572603 ~ 2577051 (-)

Expression


Co-expression Network