G1699652


Basic Information

Item Value
gene id G1699652
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 1087063 ~ 1087617 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1944909
ATGACAAGGCATAATTGGCCACTACTTGAGGACAACGAGAGacacttcctcttcctctatGTGACTGTGGGAGggtgaggagtacagtactcagAGGTTGGAGGGCCATGGCCTCATCTTCCTCTATGTGACTGGGAGggtgaggagtacagtactcagAGGCTGACAGACAGATAGGTTACATGGATCACAATTAggattagttttagggttagttttagggttagttttagggttagcgTTAAGGTTAGGTATAACCCCTTCAAACCCTCACTATGTTACCCATGTGTTAACAACCCCCATTGTAGTGGAATAGGGTGCACTTGTTGTGAGTAGGGCCcattgtagtgcactatatatggaatagggtgcacttGTTGTGAGTAGGGCCCATTGTAGTGGAATAGTGTGCCACTTGGGACATAAATGTCATCCCCATCAGGCTACTGAGAATTCACAGTAATCCCAAAGTATAGAGTGGCATTGCA

Function

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU1944909 True 488 lncRNA 0.46 2 1087063 1087617

Neighbor

gene id symbol gene type direction distance location
LOC118942824 LOC106609805 coding upstream 87499 853031 ~ 999564 (+)
LOC118936449 LOC106575063 coding upstream 377063 647909 ~ 710000 (+)
LOC101268929 LOC101268929 coding upstream 520741 479755 ~ 566322 (+)
LOC118942821 wnt5b coding upstream 622489 225129 ~ 464574 (+)
LOC118942820 LOC108442871 coding upstream 892845 60262 ~ 194218 (+)
LOC110518351 LOC103459268 coding downstream 69097 1156714 ~ 1305903 (+)
LOC110499702 tcpb coding downstream 389263 1476880 ~ 1487165 (+)
LOC118943024 NA coding downstream 396410 1484027 ~ 1484168 (+)
LOC110499710 LOC106596118 coding downstream 402076 1489693 ~ 1500056 (+)
LOC110517600 rab3ip coding downstream 429745 1517362 ~ 1600082 (+)
G1699643 NA non-coding upstream 18420 1064676 ~ 1068643 (+)
G1699632 NA non-coding upstream 38891 1047459 ~ 1048172 (+)
G1699625 NA non-coding upstream 70596 1016140 ~ 1016467 (+)
G1699616 NA non-coding upstream 103814 982993 ~ 983249 (+)
G1699615 NA non-coding upstream 104707 981506 ~ 982356 (+)
G1699659 NA non-coding downstream 14309 1101926 ~ 1124073 (+)
G1699693 NA non-coding downstream 117471 1205088 ~ 1206831 (+)
G1699548 NA non-coding downstream 218582 1306199 ~ 1307614 (+)
G1699547 NA non-coding downstream 220195 1307812 ~ 1308744 (+)
G1699629 NA other upstream 1037 1082691 ~ 1086026 (+)
G1699655 NA other downstream 6532 1094149 ~ 1100221 (+)
G1699724 LOC106592130 other downstream 254882 1342499 ~ 1343138 (+)
G1699804 NA other downstream 450339 1537956 ~ 1538880 (+)
LOC110500915 LOC106576535 other downstream 578139 1607414 ~ 1669220 (+)

Expression


Co-expression Network