G1700610



Basic Information


Item Value
gene id G1700610
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 1089848 ~ 1090221 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU1946146
GGGTACTATAGCCCAGAACAGTCACAGATAATACCAGACCACTGTCACAGAGGGGTACTATAGCCCAGAACAGTCACAGATAATACCAGATCACTGTCACAGAGGGGTACTGTAAACCAGAACAGTCACAGATAATACCAGATCACTGTCACAGAGGGGTACTATAGCCCAGAACAGTCAGAGTTAATGTCAGGCTCAGCCATTACTTCTGCACCATTCACACTATGGTTGATTGGTGTGTGACATGGGTAGACTTAGTCATGGCTCTATCCCCTCTCGCCCTGGCTCAGCATGGGTCTAATGGGTCTCTCCCTGAACACTG

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU1946146 True 322 lncRNA 0.48 2 1089848 1090221

Neighbor


gene id symbol gene type direction distance location
LOC110516566 LOC106576623 coding downstream 238082 824590 ~ 851766 (-)
cacna2d4a cacna2d4 coding downstream 304474 585735 ~ 785374 (-)
LOC118942823 NA coding downstream 506831 581374 ~ 597675 (-)
LOC110517722 LOC106590767 coding downstream 740863 345973 ~ 348985 (-)
LOC118942822 NA coding downstream 824213 261114 ~ 265635 (-)
LOC110511372 LOC106592130 coding upstream 229000 1319221 ~ 1348497 (-)
LOC110527029 LOC106592131 coding upstream 258378 1348599 ~ 1357031 (-)
LOC118942825 frs2 coding upstream 273008 1363229 ~ 1446417 (-)
LOC110499705 LOC106609801 coding upstream 358583 1448804 ~ 1453886 (-)
LOC110499704 cpsf6 coding upstream 364345 1454566 ~ 1513068 (-)
G1700569 NA non-coding downstream 55448 1033682 ~ 1034400 (-)
G1700584 NA non-coding downstream 65697 1021916 ~ 1024151 (-)
G1700583 NA non-coding downstream 68117 1019670 ~ 1021731 (-)
G1700582 NA non-coding downstream 70855 1017329 ~ 1018993 (-)
G1700572 NA non-coding downstream 107498 981518 ~ 982350 (-)
G1700612 NA non-coding upstream 8026 1098247 ~ 1103848 (-)
G1700621 NA non-coding upstream 34353 1124574 ~ 1137671 (-)
G1700658 NA non-coding upstream 114924 1205145 ~ 1205665 (-)
G1700697 NA non-coding upstream 190864 1281085 ~ 1283069 (-)
G1700712 NA non-coding upstream 222735 1312956 ~ 1315950 (-)
G1700312 NA other downstream 735339 352487 ~ 354509 (-)
LOC110512520 LOC106609724 other upstream 1032308 2113042 ~ 2128710 (-)
G1701041 NA other upstream 1098212 2188433 ~ 2189666 (-)
G1701824 NA other upstream 1482453 2572603 ~ 2577051 (-)

Expression



Co-expression Network