Gene
RNA
| Item | Value |
|---|---|
| gene id | G1700621 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048585.1 |
| NCBI id | CM023239.2 |
| chromosome length | 64935962 |
| location | 1124574 ~ 1137671 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1946158 | True | 267 | lncRNA | 0.40 | 2 | 1124574 | 1137671 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110516566 | LOC106576623 | coding | downstream | 272808 | 824590 ~ 851766 (-) |
| cacna2d4a | cacna2d4 | coding | downstream | 339200 | 585735 ~ 785374 (-) |
| LOC118942823 | NA | coding | downstream | 541557 | 581374 ~ 597675 (-) |
| LOC110517722 | LOC106590767 | coding | downstream | 775589 | 345973 ~ 348985 (-) |
| LOC118942822 | NA | coding | downstream | 858939 | 261114 ~ 265635 (-) |
| LOC110511372 | LOC106592130 | coding | upstream | 181550 | 1319221 ~ 1348497 (-) |
| LOC110527029 | LOC106592131 | coding | upstream | 210928 | 1348599 ~ 1357031 (-) |
| LOC118942825 | frs2 | coding | upstream | 225558 | 1363229 ~ 1446417 (-) |
| LOC110499705 | LOC106609801 | coding | upstream | 311133 | 1448804 ~ 1453886 (-) |
| LOC110499704 | cpsf6 | coding | upstream | 316895 | 1454566 ~ 1513068 (-) |
| G1700612 | NA | non-coding | downstream | 20726 | 1098247 ~ 1103848 (-) |
| G1700610 | NA | non-coding | downstream | 34353 | 1089848 ~ 1090221 (-) |
| G1700569 | NA | non-coding | downstream | 90174 | 1033682 ~ 1034400 (-) |
| G1700584 | NA | non-coding | downstream | 100423 | 1021916 ~ 1024151 (-) |
| G1700583 | NA | non-coding | downstream | 102843 | 1019670 ~ 1021731 (-) |
| G1700658 | NA | non-coding | upstream | 67474 | 1205145 ~ 1205665 (-) |
| G1700697 | NA | non-coding | upstream | 143414 | 1281085 ~ 1283069 (-) |
| G1700712 | NA | non-coding | upstream | 175285 | 1312956 ~ 1315950 (-) |
| G1700726 | NA | non-coding | upstream | 219893 | 1357564 ~ 1359669 (-) |
| G1700701 | LOC106593264 | non-coding | upstream | 278997 | 1416668 ~ 1485260 (-) |
| G1700312 | NA | other | downstream | 770065 | 352487 ~ 354509 (-) |
| LOC110512520 | LOC106609724 | other | upstream | 984858 | 2113042 ~ 2128710 (-) |
| G1701041 | NA | other | upstream | 1050762 | 2188433 ~ 2189666 (-) |
| G1701824 | NA | other | upstream | 1435003 | 2572603 ~ 2577051 (-) |
