G1699553


Basic Information

Item Value
gene id G1699553
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 1308829 ~ 1309150 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1944775
TGTAAATAGTTGCTATGAGAGACAGGGGAAAATAGTTGTTGAATATAAGACTTGTTGTCTGTCTGACATTATCGTTGCGTTATTGTTTTTACGTGCATGATGTGAAATAGTTTTAGATGTGGTCTCTTTGAGAGCGTATTCCCCACAAGATAGACCCGGTAGACaaattacatttttatcccatTGACAATCCATCTGACGAATAAGGATATATATATTAATTGAAGGTATACATAGTTTTGGGAGAGAGTTTATGAACAGGAGGAAACATCAAAGTATTATTGTATAATGTGCTTGGACCAAAAGACATAGCACTGGTCCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1944775 True 322 lncRNA 0.35 1 1308829 1309150

Neighbor

gene id symbol gene type direction distance location
LOC110518351 LOC103459268 coding upstream 2926 1156714 ~ 1305903 (+)
LOC118942824 LOC106609805 coding upstream 309265 853031 ~ 999564 (+)
LOC118936449 LOC106575063 coding upstream 598829 647909 ~ 710000 (+)
LOC101268929 LOC101268929 coding upstream 742507 479755 ~ 566322 (+)
LOC118942821 wnt5b coding upstream 844255 225129 ~ 464574 (+)
LOC110499702 tcpb coding downstream 167730 1476880 ~ 1487165 (+)
LOC118943024 NA coding downstream 174877 1484027 ~ 1484168 (+)
LOC110499710 LOC106596118 coding downstream 180543 1489693 ~ 1500056 (+)
LOC110517600 rab3ip coding downstream 208212 1517362 ~ 1600082 (+)
LOC110500915 LOC106576535 coding downstream 298264 1607414 ~ 1669220 (+)
G1699547 NA non-coding upstream 85 1307812 ~ 1308744 (+)
G1699548 NA non-coding upstream 1215 1306199 ~ 1307614 (+)
G1699693 NA non-coding upstream 101998 1205088 ~ 1206831 (+)
G1699659 NA non-coding upstream 184756 1101926 ~ 1124073 (+)
G1699552 NA non-coding downstream 1890 1311040 ~ 1311740 (+)
G1699546 NA non-coding downstream 3629 1312779 ~ 1384859 (+)
G1699720 NA non-coding downstream 12204 1321354 ~ 1321902 (+)
G1699721 NA non-coding downstream 12819 1321969 ~ 1323818 (+)
G1699730 LOC106592131 non-coding downstream 43789 1352939 ~ 1354797 (+)
G1699655 NA other upstream 208608 1094149 ~ 1100221 (+)
G1699629 NA other upstream 222803 1082691 ~ 1086026 (+)
LOC118942820 LOC108442871 other upstream 1167580 60262 ~ 194218 (+)
G1699724 LOC106592130 other downstream 33349 1342499 ~ 1343138 (+)
G1699804 NA other downstream 228806 1537956 ~ 1538880 (+)
LOC110499743 cnot2 other downstream 449319 1688942 ~ 1769720 (+)
G1699934 NA other downstream 558544 1867694 ~ 1869554 (+)

Expression


Co-expression Network