G1699721


Basic Information

Item Value
gene id G1699721
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 1321969 ~ 1323818 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1944989
GAACAATCCCACCTTTGTCTTTAGGCTGAATGGTTGAAAGGGTGTCTGACTGCGTGTTTGTTCTCATCACACAAAAGGACACAATGGAAAATATGTGTTTCTCTCTAAACTGAGTCGAGTCTAAAAATGCAGAGGTCAGATCCACGGTTGACGTGTTGTGACAGGGTTGATTTATTACCATGGACCCAAACTCAGATTTAGAAGGGAAGGCTAAAAACCTAACCTCAGATTTAGAAGGGAAGGTTTACACCCAACCTCAGATTTAGAAGGGAAGGTTTACACCTAACCTCAGATTTAGAAGGGAAGGTTTACACATAGTTTCCTTGACCTTCAGTCTCCAGTTTCAGCTGGGAGGCAGAGCAAAATGTCTTCTTCCTGATCATTAGATTCAGAGAATCTCATTGGATAAGCCTTTCATCTCTGATGTGATAGGACTTCGTATTAAGGCAAACAAAACAACACTTGGAGTGATGCGTACAACTGATGAGTGACACCAAAACCCCCTTTTTTTTTACAGCAGGTACATACAGTATTTGCCTTGTAAAAAGAGATCCAGTCGATCACCCATTCAGAACTGTTAATGCTCACCTCGTAAGCTAAAGCGAAGGTTCCCCAGTGAATAGCCAGGGAGTGTCTGGCCTGGATGTCTTTGTGGATCTGCACAGCCTCCTCCGGGTCCACATGCTGTCCACGCATTACATCTCTGAGGGACGACAAACTTGTGTTTTGTGGGTTTGGCCTAATGAAGGCATAATAAACTTACTGAACTTCAGTTGACtttaatacattctaagtgaATATACAGTTGACTTGAATAAATTCTAAGTGAATATTCAGTTGAGGGAAATCTAATACTATAGTCCATGATCAAACCCTCCTTCTAGAATTCTACTGAGTGTGCAGGCttttactccaaccctgttctaaACCTGATTCAGTTCATCAAGGTCCTGATgaacagctgattagataaagcaGGTGTTAGAGCAGGGTTGGAACCAAAACCTGCACTCCCAGTGGATCTCCATGGGGGGGGGGTATGGGCAGCCTTGTACGAAAGAAATCACAgctgtacactagtttcatacctgggcaggacagctctacactagtttcatacctgggcaggacagctctacactagtttcatacctgggcaggacagctctacactagtttcatacctgagcaggacagctctacactaattccatacctgggcaggacagctgtacgctagtttcatacctgggcagg

Function

NR:

description
PREDICTED: N-acyl-phosphatidylethanolamine-hydrolyzing phospholipase D-like, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1944989 True 1257 lncRNA 0.44 2 1321969 1323818

Neighbor

gene id symbol gene type direction distance location
LOC110518351 LOC103459268 coding upstream 16066 1156714 ~ 1305903 (+)
LOC118942824 LOC106609805 coding upstream 322405 853031 ~ 999564 (+)
LOC118936449 LOC106575063 coding upstream 611969 647909 ~ 710000 (+)
LOC101268929 LOC101268929 coding upstream 755647 479755 ~ 566322 (+)
LOC118942821 wnt5b coding upstream 857395 225129 ~ 464574 (+)
LOC110499702 tcpb coding downstream 153062 1476880 ~ 1487165 (+)
LOC118943024 NA coding downstream 160209 1484027 ~ 1484168 (+)
LOC110499710 LOC106596118 coding downstream 165875 1489693 ~ 1500056 (+)
LOC110517600 rab3ip coding downstream 193544 1517362 ~ 1600082 (+)
LOC110500915 LOC106576535 coding downstream 283596 1607414 ~ 1669220 (+)
G1699720 NA non-coding upstream 67 1321354 ~ 1321902 (+)
G1699552 NA non-coding upstream 10229 1311040 ~ 1311740 (+)
G1699553 NA non-coding upstream 12819 1308829 ~ 1309150 (+)
G1699547 NA non-coding upstream 13225 1307812 ~ 1308744 (+)
G1699548 NA non-coding upstream 14355 1306199 ~ 1307614 (+)
G1699730 LOC106592131 non-coding downstream 29121 1352939 ~ 1354797 (+)
G1699731 NA non-coding downstream 31595 1355413 ~ 1357029 (+)
G1699732 NA non-coding downstream 36602 1360420 ~ 1361038 (+)
G1699736 NA non-coding downstream 41160 1364978 ~ 1365621 (+)
G1699744 NA non-coding downstream 61368 1385186 ~ 1386191 (+)
G1699655 NA other upstream 221748 1094149 ~ 1100221 (+)
G1699629 NA other upstream 235943 1082691 ~ 1086026 (+)
LOC118942820 LOC108442871 other upstream 1180720 60262 ~ 194218 (+)
G1699724 LOC106592130 other downstream 18681 1342499 ~ 1343138 (+)
G1699804 NA other downstream 214138 1537956 ~ 1538880 (+)
LOC110499743 cnot2 other downstream 434651 1688942 ~ 1769720 (+)
G1699934 NA other downstream 543876 1867694 ~ 1869554 (+)

Expression


Co-expression Network