G1699724 (LOC106592130)


Basic Information

Item Value
gene id G1699724
gene name LOC106592130
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 1342499 ~ 1343138 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1944994
CACCTCTTTAGAGCTGGGTACATTACTGTGATCCTTCTCCAGCAGGAAGAAACGCAGCAGGGTGGACCAGGACGGGAACTTCCACGTGGACCAGGGGTTTGTGAAGCGGCCATGTTTGTCCCGGCTCGACCCagtcacctcctcctccaaccggTAGTCCAGACGGAAGCTCTTCCTGGAGGAGCGGGAGGAGCTGCTCTTCCGAGGCCCTGCGTCCTGcagggtggaggtgggggggtcaCGGGGCCGGACCACGGCTGGGGAACCCTCCTCCGTCCCTGGGGAATCTCCAGGAGAgacacccctctcctccatcaacACCTGGTTCTCATgcacctctcctcctgctcctccgcTCTCCTCCATGGGGGGACAGTGTTGGGCTCCGGGTCTATAGGGAGGTTAATAAA

Function

NR:

description
N-acyl-phosphatidylethanolamine-hydrolyzing phospholipase D isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1944994 True 410 TUCP 0.62 2 1342499 1343138

Neighbor

gene id symbol gene type direction distance location
LOC110518351 LOC103459268 coding upstream 36596 1156714 ~ 1305903 (+)
LOC118942824 LOC106609805 coding upstream 342935 853031 ~ 999564 (+)
LOC118936449 LOC106575063 coding upstream 632499 647909 ~ 710000 (+)
LOC101268929 LOC101268929 coding upstream 776177 479755 ~ 566322 (+)
LOC118942821 wnt5b coding upstream 877925 225129 ~ 464574 (+)
LOC110499702 tcpb coding downstream 133742 1476880 ~ 1487165 (+)
LOC118943024 NA coding downstream 140889 1484027 ~ 1484168 (+)
LOC110499710 LOC106596118 coding downstream 146555 1489693 ~ 1500056 (+)
LOC110517600 rab3ip coding downstream 174224 1517362 ~ 1600082 (+)
LOC110500915 LOC106576535 coding downstream 264276 1607414 ~ 1669220 (+)
G1699721 NA non-coding upstream 18681 1321969 ~ 1323818 (+)
G1699720 NA non-coding upstream 20597 1321354 ~ 1321902 (+)
G1699552 NA non-coding upstream 30759 1311040 ~ 1311740 (+)
G1699553 NA non-coding upstream 33349 1308829 ~ 1309150 (+)
G1699547 NA non-coding upstream 33755 1307812 ~ 1308744 (+)
G1699730 LOC106592131 non-coding downstream 9801 1352939 ~ 1354797 (+)
G1699731 NA non-coding downstream 12275 1355413 ~ 1357029 (+)
G1699732 NA non-coding downstream 17282 1360420 ~ 1361038 (+)
G1699736 NA non-coding downstream 21840 1364978 ~ 1365621 (+)
G1699744 NA non-coding downstream 42048 1385186 ~ 1386191 (+)
G1699655 NA other upstream 242278 1094149 ~ 1100221 (+)
G1699629 NA other upstream 256473 1082691 ~ 1086026 (+)
LOC118942820 LOC108442871 other upstream 1201250 60262 ~ 194218 (+)
G1699804 NA other downstream 194818 1537956 ~ 1538880 (+)
LOC110499743 cnot2 other downstream 415331 1688942 ~ 1769720 (+)
G1699934 NA other downstream 524556 1867694 ~ 1869554 (+)
LOC110519348 tbc1d15 other downstream 1296202 2588642 ~ 2667278 (+)

Expression


Co-expression Network