G1699732


Basic Information

Item Value
gene id G1699732
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 1360420 ~ 1361038 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1945012
gtcatgacacagactggcacaaacaggtctgggaccaggttactttCAGGACACAGTGTAACTCCTTGTCATGACGCAGActggcacaaacaggtctgggaccaggttactttCAGGACACAGTGTAACTCCTTGTCATGACGCAGActggcacaaacaggtctgggaccaggttactttcaggacacagtgtaactccttgtcatgacacagactgacacaaacaggtctgggaccaggttactttcaggacacagtgtaactccttgtcatgacacagactg

Function

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU1945012 True 284 lncRNA 0.50 2 1360420 1361038

Neighbor

gene id symbol gene type direction distance location
LOC110518351 LOC103459268 coding upstream 54517 1156714 ~ 1305903 (+)
LOC118942824 LOC106609805 coding upstream 360856 853031 ~ 999564 (+)
LOC118936449 LOC106575063 coding upstream 650420 647909 ~ 710000 (+)
LOC101268929 LOC101268929 coding upstream 794098 479755 ~ 566322 (+)
LOC118942821 wnt5b coding upstream 895846 225129 ~ 464574 (+)
LOC110499702 tcpb coding downstream 115842 1476880 ~ 1487165 (+)
LOC118943024 NA coding downstream 122989 1484027 ~ 1484168 (+)
LOC110499710 LOC106596118 coding downstream 128655 1489693 ~ 1500056 (+)
LOC110517600 rab3ip coding downstream 156324 1517362 ~ 1600082 (+)
LOC110500915 LOC106576535 coding downstream 246376 1607414 ~ 1669220 (+)
G1699731 NA non-coding upstream 3391 1355413 ~ 1357029 (+)
G1699730 LOC106592131 non-coding upstream 5623 1352939 ~ 1354797 (+)
G1699721 NA non-coding upstream 36602 1321969 ~ 1323818 (+)
G1699720 NA non-coding upstream 38518 1321354 ~ 1321902 (+)
G1699552 NA non-coding upstream 48680 1311040 ~ 1311740 (+)
G1699736 NA non-coding downstream 3940 1364978 ~ 1365621 (+)
G1699744 NA non-coding downstream 24148 1385186 ~ 1386191 (+)
G1699761 NA non-coding downstream 66130 1427168 ~ 1428192 (+)
G1699768 NA non-coding downstream 81156 1442194 ~ 1500372 (+)
G1699773 NA non-coding downstream 89441 1450479 ~ 1451361 (+)
G1699724 LOC106592130 other upstream 17282 1342499 ~ 1343138 (+)
G1699655 NA other upstream 260199 1094149 ~ 1100221 (+)
G1699629 NA other upstream 274394 1082691 ~ 1086026 (+)
LOC118942820 LOC108442871 other upstream 1219171 60262 ~ 194218 (+)
G1699804 NA other downstream 176918 1537956 ~ 1538880 (+)
LOC110499743 cnot2 other downstream 397431 1688942 ~ 1769720 (+)
G1699934 NA other downstream 506656 1867694 ~ 1869554 (+)
LOC110519348 tbc1d15 other downstream 1278302 2588642 ~ 2667278 (+)

Expression


Co-expression Network