G1699736


Basic Information

Item Value
gene id G1699736
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 1364978 ~ 1365621 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1945024
cccCCTGCTCGGCCTGTATCAGCAACatcTTCCAACTAAATACAAAGAGAAAACAACAACTCGTTGAGAAATAATCTGATCGTACAACGACAACCAAGTCAACGCTTCTCAGTCAGAGGCATTGAACGATAATGACGATAATAACAGTTCTCCACCAGGGGCCATGACTAAAGGGCTGTTTTCTCACCGACTGGTCTGAGACCAGGAGGGGGTGTGATGACTCCTCTCCCACTGAGGGCAGCCTGGCGCTGCCTACAGACGGGTGTCGGCTAGAAGGGCGCGACGAGGCCTCACCAAACGACGGGTAGCGCCCTATACCGTTCGGTAACGTGGG

Function

NR:

description
PREDICTED: fibroblast growth factor receptor substrate 2-like, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1945024 True 334 lncRNA 0.53 2 1364978 1365621

Neighbor

gene id symbol gene type direction distance location
LOC110518351 LOC103459268 coding upstream 59075 1156714 ~ 1305903 (+)
LOC118942824 LOC106609805 coding upstream 365414 853031 ~ 999564 (+)
LOC118936449 LOC106575063 coding upstream 654978 647909 ~ 710000 (+)
LOC101268929 LOC101268929 coding upstream 798656 479755 ~ 566322 (+)
LOC118942821 wnt5b coding upstream 900404 225129 ~ 464574 (+)
LOC110499702 tcpb coding downstream 111259 1476880 ~ 1487165 (+)
LOC118943024 NA coding downstream 118406 1484027 ~ 1484168 (+)
LOC110499710 LOC106596118 coding downstream 124072 1489693 ~ 1500056 (+)
LOC110517600 rab3ip coding downstream 151741 1517362 ~ 1600082 (+)
LOC110500915 LOC106576535 coding downstream 241793 1607414 ~ 1669220 (+)
G1699732 NA non-coding upstream 3940 1360420 ~ 1361038 (+)
G1699731 NA non-coding upstream 7949 1355413 ~ 1357029 (+)
G1699730 LOC106592131 non-coding upstream 10181 1352939 ~ 1354797 (+)
G1699721 NA non-coding upstream 41160 1321969 ~ 1323818 (+)
G1699720 NA non-coding upstream 43076 1321354 ~ 1321902 (+)
G1699744 NA non-coding downstream 19565 1385186 ~ 1386191 (+)
G1699761 NA non-coding downstream 61547 1427168 ~ 1428192 (+)
G1699768 NA non-coding downstream 76573 1442194 ~ 1500372 (+)
G1699773 NA non-coding downstream 84858 1450479 ~ 1451361 (+)
G1699777 NA non-coding downstream 107615 1473236 ~ 1473963 (+)
G1699724 LOC106592130 other upstream 21840 1342499 ~ 1343138 (+)
G1699655 NA other upstream 264757 1094149 ~ 1100221 (+)
G1699629 NA other upstream 278952 1082691 ~ 1086026 (+)
LOC118942820 LOC108442871 other upstream 1223729 60262 ~ 194218 (+)
G1699804 NA other downstream 172335 1537956 ~ 1538880 (+)
LOC110499743 cnot2 other downstream 392848 1688942 ~ 1769720 (+)
G1699934 NA other downstream 502073 1867694 ~ 1869554 (+)
LOC110519348 tbc1d15 other downstream 1273719 2588642 ~ 2667278 (+)

Expression


Co-expression Network