Gene
RNA
| Item | Value |
|---|---|
| gene id | G1700701 |
| gene name | LOC106593264 |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048585.1 |
| NCBI id | CM023239.2 |
| chromosome length | 64935962 |
| location | 1416668 ~ 1485260 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: T-complex protein 1 subunit beta-like, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1946255 | True | 363 | lncRNA | 0.54 | 2 | 1416668 | 1485260 |
1,380,000
1,390,000
1,400,000
1,410,000
1,420,000
1,430,000
1,440,000
1,450,000
1,460,000
1,470,000
1,480,000
1,490,000
1,500,000
1,510,000
1,520,000
NC_048585.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110527029 | LOC106592131 | coding | downstream | 59637 | 1348599 ~ 1357031 (-) |
| LOC110511372 | LOC106592130 | coding | downstream | 68171 | 1319221 ~ 1348497 (-) |
| LOC110516566 | LOC106576623 | coding | downstream | 564902 | 824590 ~ 851766 (-) |
| cacna2d4a | cacna2d4 | coding | downstream | 631294 | 585735 ~ 785374 (-) |
| LOC118942823 | NA | coding | downstream | 833651 | 581374 ~ 597675 (-) |
| LOC110511332 | LOC106576651 | coding | upstream | 15171 | 1500431 ~ 1516184 (-) |
| ptprbl | LOC106609809 | coding | upstream | 378714 | 1863974 ~ 1985304 (-) |
| LOC118942826 | NA | coding | upstream | 500650 | 1985910 ~ 1990032 (-) |
| LOC110499711 | ptprr | coding | upstream | 506217 | 1991477 ~ 2085804 (-) |
| LOC110512520 | LOC106609724 | coding | upstream | 627782 | 2113042 ~ 2128710 (-) |
| G1700726 | NA | non-coding | downstream | 56999 | 1357564 ~ 1359669 (-) |
| G1700712 | NA | non-coding | downstream | 100718 | 1312956 ~ 1315950 (-) |
| G1700697 | NA | non-coding | downstream | 133599 | 1281085 ~ 1283069 (-) |
| G1700658 | NA | non-coding | downstream | 211003 | 1205145 ~ 1205665 (-) |
| G1700621 | NA | non-coding | downstream | 278997 | 1124574 ~ 1137671 (-) |
| G1700702 | NA | non-coding | upstream | 781 | 1486041 ~ 1487164 (-) |
| G1700760 | NA | non-coding | upstream | 6193 | 1491453 ~ 1492356 (-) |
| G1700766 | NA | non-coding | upstream | 19245 | 1504505 ~ 1504791 (-) |
| G1700778 | NA | non-coding | upstream | 52531 | 1537791 ~ 1538979 (-) |
| G1700800 | NA | non-coding | upstream | 107960 | 1593220 ~ 1593454 (-) |
| G1700312 | NA | other | downstream | 1062159 | 352487 ~ 354509 (-) |
| G1701041 | NA | other | upstream | 703173 | 2188433 ~ 2189666 (-) |
| G1701824 | NA | other | upstream | 1087414 | 2572603 ~ 2577051 (-) |
| G1701930 | NA | other | upstream | 1298682 | 2783942 ~ 2829582 (-) |
| G1702117 | NA | other | upstream | 1743742 | 3229002 ~ 3230041 (-) |
