Gene
RNA
| Item | Value |
|---|---|
| gene id | G1700710 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048585.1 |
| NCBI id | CM023239.2 |
| chromosome length | 64935962 |
| location | 1442197 ~ 1500408 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1946277 | False | 326 | lncRNA | 0.40 | 2 | 1442197 | 1500408 |
| TU1946278 | True | 330 | lncRNA | 0.40 | 2 | 1442197 | 1500408 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110527029 | LOC106592131 | coding | downstream | 85166 | 1348599 ~ 1357031 (-) |
| LOC110511372 | LOC106592130 | coding | downstream | 93700 | 1319221 ~ 1348497 (-) |
| LOC110516566 | LOC106576623 | coding | downstream | 590431 | 824590 ~ 851766 (-) |
| cacna2d4a | cacna2d4 | coding | downstream | 656823 | 585735 ~ 785374 (-) |
| LOC118942823 | NA | coding | downstream | 859180 | 581374 ~ 597675 (-) |
| LOC110511332 | LOC106576651 | coding | upstream | 23 | 1500431 ~ 1516184 (-) |
| ptprbl | LOC106609809 | coding | upstream | 363566 | 1863974 ~ 1985304 (-) |
| LOC118942826 | NA | coding | upstream | 485502 | 1985910 ~ 1990032 (-) |
| LOC110499711 | ptprr | coding | upstream | 491069 | 1991477 ~ 2085804 (-) |
| LOC110512520 | LOC106609724 | coding | upstream | 612634 | 2113042 ~ 2128710 (-) |
| G1700726 | NA | non-coding | downstream | 82528 | 1357564 ~ 1359669 (-) |
| G1700712 | NA | non-coding | downstream | 126247 | 1312956 ~ 1315950 (-) |
| G1700697 | NA | non-coding | downstream | 159128 | 1281085 ~ 1283069 (-) |
| G1700658 | NA | non-coding | downstream | 236532 | 1205145 ~ 1205665 (-) |
| G1700621 | NA | non-coding | downstream | 304526 | 1124574 ~ 1137671 (-) |
| G1700766 | NA | non-coding | upstream | 4097 | 1504505 ~ 1504791 (-) |
| G1700778 | NA | non-coding | upstream | 37383 | 1537791 ~ 1538979 (-) |
| G1700800 | NA | non-coding | upstream | 92812 | 1593220 ~ 1593454 (-) |
| G1700802 | NA | non-coding | upstream | 97014 | 1597422 ~ 1647912 (-) |
| G1700818 | NA | non-coding | upstream | 136023 | 1636431 ~ 1637059 (-) |
| G1700312 | NA | other | downstream | 1087688 | 352487 ~ 354509 (-) |
| G1701041 | NA | other | upstream | 688025 | 2188433 ~ 2189666 (-) |
| G1701824 | NA | other | upstream | 1072266 | 2572603 ~ 2577051 (-) |
| G1701930 | NA | other | upstream | 1283534 | 2783942 ~ 2829582 (-) |
| G1702117 | NA | other | upstream | 1728594 | 3229002 ~ 3230041 (-) |
