G1699819


Basic Information

Item Value
gene id G1699819
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 1571631 ~ 1572818 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1945132
tcctttcagtctgacagtaacagtcctgtagatcatatatcagtctgacagtaacagtcctgtagatcatatcctatcagtctgacagtaacagtcctgtagattatatatcagtctgacggtaacagtcctgtagattatatatcagtctgacagtaacagtcctgtagatcgtatatcagtctgacagtaacagtcctgtagatcatatcctatcagtctgacagtaacagtcctgtagatcatatcctatcagtctgacagtaacagtcctgtagattatatcctatcagtctgatggtaacagtcctgtagatcatatcctatcagtctgatggtaacagtcctgtagatcatatatcagtctgacagtaacagtcctgtagatcatatatcagtctgacagtaacagtcctgtagattatatatcagtctgacagtaacagtcctgtagatcatatcctatcagtctgacagtaacagtcctgtagatcatatatcagtctgacagtaacagtcctgtagatcatatcctatcagtctgacagtaacagtcctgtagattatatcctatcagtctgacagtaacagtcctgtagatcgtatatcagtctgacagtaacagtcctgtagatcgtatatcagtctgacagtaacagtcctgtagatcgtatatcagtctgacagtaacagtcctgtagatcatatatcagtctgacagtaacagtcctgtagattatatcctatcagtctgacagtaacagtcctgtagattatatcctatcagtctgacagtaacagtcctgtagattatatcctatcagtctgacagtaacagtcctgtagattatatcctatcagtctgacagtaacagtcctgtagatcatatatcagtctgacagtaacagtcctgtagatcgtatatcagtctgacagtaacagtcctgtagatcatatcctatcagtctgacagtaacagtcctgtagatcgtatatcagtctgatggtaacagtcctgtagatcgtatatcagtctgacagtaacagtcctgtagatcatatcctatcagtctgacagtaacagtcctgtagatcgtatatcagtctgatggtaac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1945132 True 1117 lncRNA 0.39 2 1571631 1572818

Neighbor

gene id symbol gene type direction distance location
LOC110499710 LOC106596118 coding upstream 71575 1489693 ~ 1500056 (+)
LOC110499702 tcpb coding upstream 84466 1476880 ~ 1487165 (+)
LOC118943024 NA coding upstream 87463 1484027 ~ 1484168 (+)
LOC110518351 LOC103459268 coding upstream 265728 1156714 ~ 1305903 (+)
LOC118942824 LOC106609805 coding upstream 572067 853031 ~ 999564 (+)
LOC110500915 LOC106576535 coding downstream 34596 1607414 ~ 1669220 (+)
LOC118942986 NA coding downstream 98241 1671059 ~ 1673293 (+)
LOC110499743 cnot2 coding downstream 116124 1688942 ~ 1769720 (+)
LOC110536528 kcnmb4 coding downstream 209065 1781883 ~ 1855471 (+)
LOC110499712 LOC106576627 coding downstream 520948 2093766 ~ 2102425 (+)
G1699812 NA non-coding upstream 9439 1560132 ~ 1562192 (+)
G1699800 NA non-coding upstream 37413 1532639 ~ 1534218 (+)
G1699768 NA non-coding upstream 71259 1442194 ~ 1500372 (+)
G1699777 NA non-coding upstream 97668 1473236 ~ 1473963 (+)
G1699773 NA non-coding upstream 120270 1450479 ~ 1451361 (+)
G1699826 NA non-coding downstream 19572 1592390 ~ 1592616 (+)
G1699827 NA non-coding downstream 20311 1593129 ~ 1593328 (+)
G1699837 NA non-coding downstream 55539 1628357 ~ 1628781 (+)
G1699852 NA non-coding downstream 101084 1673902 ~ 1679900 (+)
G1699856 NA non-coding downstream 108864 1681682 ~ 1682227 (+)
G1699804 NA other upstream 32751 1537956 ~ 1538880 (+)
G1699724 LOC106592130 other upstream 228493 1342499 ~ 1343138 (+)
G1699655 NA other upstream 471410 1094149 ~ 1100221 (+)
G1699629 NA other upstream 485605 1082691 ~ 1086026 (+)
G1699934 NA other downstream 294876 1867694 ~ 1869554 (+)
LOC110519348 tbc1d15 other downstream 1066522 2588642 ~ 2667278 (+)
G1701265 NA other downstream 1271886 2844704 ~ 2849603 (+)

Expression


Co-expression Network