G1699826


Basic Information

Item Value
gene id G1699826
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 1592390 ~ 1592616 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1945142
caccattcattctgattccaccctgctctctcaccattcattctgattccaccctgctctctcaccattcattTCATTCTTCCtcgatgtgtctctctctcgctctgtgtctctcccctcgctctgtgtctctccccctcgctctgtgtctctccccctcgctctgtgtgtctctctccccctcgctctgtgtgtctctctccccctcgctctgtgtgtctctctcc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1945142 True 227 lncRNA 0.56 1 1592390 1592616

Neighbor

gene id symbol gene type direction distance location
LOC110499710 LOC106596118 coding upstream 92334 1489693 ~ 1500056 (+)
LOC110499702 tcpb coding upstream 105225 1476880 ~ 1487165 (+)
LOC118943024 NA coding upstream 108222 1484027 ~ 1484168 (+)
LOC110518351 LOC103459268 coding upstream 286487 1156714 ~ 1305903 (+)
LOC118942824 LOC106609805 coding upstream 592826 853031 ~ 999564 (+)
LOC110500915 LOC106576535 coding downstream 14798 1607414 ~ 1669220 (+)
LOC118942986 NA coding downstream 78443 1671059 ~ 1673293 (+)
LOC110499743 cnot2 coding downstream 96326 1688942 ~ 1769720 (+)
LOC110536528 kcnmb4 coding downstream 189267 1781883 ~ 1855471 (+)
LOC110499712 LOC106576627 coding downstream 501150 2093766 ~ 2102425 (+)
G1699819 NA non-coding upstream 19572 1571631 ~ 1572818 (+)
G1699812 NA non-coding upstream 30198 1560132 ~ 1562192 (+)
G1699800 NA non-coding upstream 58172 1532639 ~ 1534218 (+)
G1699768 NA non-coding upstream 92018 1442194 ~ 1500372 (+)
G1699827 NA non-coding downstream 513 1593129 ~ 1593328 (+)
G1699837 NA non-coding downstream 35741 1628357 ~ 1628781 (+)
G1699852 NA non-coding downstream 81286 1673902 ~ 1679900 (+)
G1699856 NA non-coding downstream 89066 1681682 ~ 1682227 (+)
G1699863 NA non-coding downstream 120090 1712706 ~ 1714944 (+)
G1699804 NA other upstream 53510 1537956 ~ 1538880 (+)
G1699724 LOC106592130 other upstream 249252 1342499 ~ 1343138 (+)
G1699655 NA other upstream 492169 1094149 ~ 1100221 (+)
G1699629 NA other upstream 506364 1082691 ~ 1086026 (+)
G1699934 NA other downstream 275078 1867694 ~ 1869554 (+)
LOC110519348 tbc1d15 other downstream 1046724 2588642 ~ 2667278 (+)
G1701265 NA other downstream 1252088 2844704 ~ 2849603 (+)

Expression


Co-expression Network