G1699827


Basic Information

Item Value
gene id G1699827
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 1593129 ~ 1593328 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1945143
GCTTTAGGTGATTAGACATTCAGCTGTTTTCAGGGTAATTCTGGGCCTCATTCTTACCACTTGGTTTCAGAATGGTCTTTCTTACCACTTGGTTTCAGAATGGTCTTTCTTACCACTTGGTTTCAGAATGGTCTTTCTTACCACTTGGTTTCAGAATGGCCTTTCTTACCACTTGGTTTCAGAATGGTCTTTCTTACCAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1945143 True 200 lncRNA 0.41 1 1593129 1593328

Neighbor

gene id symbol gene type direction distance location
LOC110499710 LOC106596118 coding upstream 93073 1489693 ~ 1500056 (+)
LOC110499702 tcpb coding upstream 105964 1476880 ~ 1487165 (+)
LOC118943024 NA coding upstream 108961 1484027 ~ 1484168 (+)
LOC110518351 LOC103459268 coding upstream 287226 1156714 ~ 1305903 (+)
LOC118942824 LOC106609805 coding upstream 593565 853031 ~ 999564 (+)
LOC110500915 LOC106576535 coding downstream 14086 1607414 ~ 1669220 (+)
LOC118942986 NA coding downstream 77731 1671059 ~ 1673293 (+)
LOC110499743 cnot2 coding downstream 95614 1688942 ~ 1769720 (+)
LOC110536528 kcnmb4 coding downstream 188555 1781883 ~ 1855471 (+)
LOC110499712 LOC106576627 coding downstream 500438 2093766 ~ 2102425 (+)
G1699826 NA non-coding upstream 513 1592390 ~ 1592616 (+)
G1699819 NA non-coding upstream 20311 1571631 ~ 1572818 (+)
G1699812 NA non-coding upstream 30937 1560132 ~ 1562192 (+)
G1699800 NA non-coding upstream 58911 1532639 ~ 1534218 (+)
G1699777 NA non-coding upstream 119166 1473236 ~ 1473963 (+)
G1699837 NA non-coding downstream 35029 1628357 ~ 1628781 (+)
G1699852 NA non-coding downstream 80574 1673902 ~ 1679900 (+)
G1699856 NA non-coding downstream 88354 1681682 ~ 1682227 (+)
G1699863 NA non-coding downstream 119378 1712706 ~ 1714944 (+)
G1699872 NA non-coding downstream 145723 1739051 ~ 1739763 (+)
G1699804 NA other upstream 54249 1537956 ~ 1538880 (+)
G1699724 LOC106592130 other upstream 249991 1342499 ~ 1343138 (+)
G1699655 NA other upstream 492908 1094149 ~ 1100221 (+)
G1699629 NA other upstream 507103 1082691 ~ 1086026 (+)
G1699934 NA other downstream 274366 1867694 ~ 1869554 (+)
LOC110519348 tbc1d15 other downstream 1046012 2588642 ~ 2667278 (+)
G1701265 NA other downstream 1251376 2844704 ~ 2849603 (+)

Expression


Co-expression Network