Gene
RNA
| Item | Value |
|---|---|
| gene id | G1700800 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048585.1 |
| NCBI id | CM023239.2 |
| chromosome length | 64935962 |
| location | 1593220 ~ 1593454 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| oocyte zinc finger protein XlCOF6-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1946391 | True | 235 | lncRNA | 0.40 | 1 | 1593220 | 1593454 |
1,591,600
1,592,000
1,592,400
1,592,800
1,593,200
1,593,600
1,594,000
1,594,400
1,594,800
1,595,200
1,595,600
NC_048585.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110511332 | LOC106576651 | coding | downstream | 77036 | 1500431 ~ 1516184 (-) |
| LOC110499704 | cpsf6 | coding | downstream | 116703 | 1454566 ~ 1513068 (-) |
| LOC110499705 | LOC106609801 | coding | downstream | 139334 | 1448804 ~ 1453886 (-) |
| LOC118942825 | frs2 | coding | downstream | 146803 | 1363229 ~ 1446417 (-) |
| LOC110527029 | LOC106592131 | coding | downstream | 236189 | 1348599 ~ 1357031 (-) |
| ptprbl | LOC106609809 | coding | upstream | 270520 | 1863974 ~ 1985304 (-) |
| LOC118942826 | NA | coding | upstream | 392456 | 1985910 ~ 1990032 (-) |
| LOC110499711 | ptprr | coding | upstream | 398023 | 1991477 ~ 2085804 (-) |
| LOC110512520 | LOC106609724 | coding | upstream | 519588 | 2113042 ~ 2128710 (-) |
| LOC110499714 | LOC106609803 | coding | upstream | 535579 | 2129033 ~ 2138088 (-) |
| G1700778 | NA | non-coding | downstream | 54241 | 1537791 ~ 1538979 (-) |
| G1700766 | NA | non-coding | downstream | 88429 | 1504505 ~ 1504791 (-) |
| G1700710 | NA | non-coding | downstream | 92812 | 1442197 ~ 1500408 (-) |
| G1700760 | NA | non-coding | downstream | 100864 | 1491453 ~ 1492356 (-) |
| G1700802 | NA | non-coding | upstream | 3968 | 1597422 ~ 1647912 (-) |
| G1700818 | NA | non-coding | upstream | 42977 | 1636431 ~ 1637059 (-) |
| G1700820 | NA | non-coding | upstream | 44637 | 1638091 ~ 1733616 (-) |
| G1700827 | NA | non-coding | upstream | 72203 | 1665657 ~ 1668599 (-) |
| G1700829 | NA | non-coding | upstream | 88133 | 1681587 ~ 1682378 (-) |
| LOC110511372 | LOC106592130 | other | downstream | 269857 | 1319221 ~ 1348497 (-) |
| G1700312 | NA | other | downstream | 1238711 | 352487 ~ 354509 (-) |
| G1701041 | NA | other | upstream | 594979 | 2188433 ~ 2189666 (-) |
| G1701824 | NA | other | upstream | 979220 | 2572603 ~ 2577051 (-) |
| G1701930 | NA | other | upstream | 1190488 | 2783942 ~ 2829582 (-) |
| G1702117 | NA | other | upstream | 1635548 | 3229002 ~ 3230041 (-) |
