G1699837


Basic Information

Item Value
gene id G1699837
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 1628357 ~ 1628781 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1945162
GTTACTACAGTTAGATGAGTTAATAGGTCATGTTGTGAGTTACTACAGTTAGATGAGTTAATAGGTCATGTTGTGAGTTACTACAGTTAGATGAGTTAATAGGTCATGTTGTGAGGTACTACAGTCAGATGAGTTAATAGGTCATGTTGTGAGTTACTACAGTTAGATGAGTTAATAGGTCATGTTGTGAGTTACTACAGTTAGATGAGTTAATAGGTCATGTTGTGAGGCGGTTTCAATTGAGAAATAGATAGTCGTTTGGCTAGATCGGTCCACTGTCAAGTTGTTTATTAGTCGTATACCACACATATCCCGTACATGCatcgtccaatgaaatgcttacttgtag
>TU1945163
GTTACTACAGTTAGATGAGTTAATAGGTCATGTTGTGAGTTACTACAGTTAGATGAGTTAATAGGTCATGTTGTGAGTTACTACAGTTAGATGAGTTAATAGGTCATGTTGTGAGGTACTACAGTCAGATGAGTTAATAGGTCATGTTCTGAGTTACTACAGTTAGATGAGTTAATAGGTCATGTTGTGAGTTACTACAGTTAGATGAGTTAATAGGTCATGTTGTGAGGCGGTTTCAATTGAGAAATAGATAGTCGTTTGGCTAGATCGGTCCACTGTCAAGTTGTTTATTAGTCGTATACCACACATATCCCGTACATGCatcgtccaatgaaatgcttacttgtag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1945162 False 349 lncRNA 0.37 3 1628357 1628781
TU1945163 True 349 lncRNA 0.37 3 1628357 1628781

Neighbor

gene id symbol gene type direction distance location
LOC110517600 rab3ip coding upstream 28275 1517362 ~ 1600082 (+)
LOC110499710 LOC106596118 coding upstream 128301 1489693 ~ 1500056 (+)
LOC110499702 tcpb coding upstream 141192 1476880 ~ 1487165 (+)
LOC118943024 NA coding upstream 144189 1484027 ~ 1484168 (+)
LOC110518351 LOC103459268 coding upstream 322454 1156714 ~ 1305903 (+)
LOC118942986 NA coding downstream 42278 1671059 ~ 1673293 (+)
LOC110499743 cnot2 coding downstream 60161 1688942 ~ 1769720 (+)
LOC110536528 kcnmb4 coding downstream 153102 1781883 ~ 1855471 (+)
LOC110499712 LOC106576627 coding downstream 464985 2093766 ~ 2102425 (+)
LOC118942829 LOC105023115 coding downstream 629935 2258716 ~ 2443078 (+)
G1699827 NA non-coding upstream 35029 1593129 ~ 1593328 (+)
G1699826 NA non-coding upstream 35741 1592390 ~ 1592616 (+)
G1699819 NA non-coding upstream 55539 1571631 ~ 1572818 (+)
G1699812 NA non-coding upstream 66165 1560132 ~ 1562192 (+)
G1699800 NA non-coding upstream 94139 1532639 ~ 1534218 (+)
G1699852 NA non-coding downstream 45121 1673902 ~ 1679900 (+)
G1699856 NA non-coding downstream 52901 1681682 ~ 1682227 (+)
G1699863 NA non-coding downstream 83925 1712706 ~ 1714944 (+)
G1699872 NA non-coding downstream 110270 1739051 ~ 1739763 (+)
G1699877 NA non-coding downstream 131656 1760437 ~ 1762078 (+)
G1699804 NA other upstream 89477 1537956 ~ 1538880 (+)
G1699724 LOC106592130 other upstream 285219 1342499 ~ 1343138 (+)
G1699655 NA other upstream 528136 1094149 ~ 1100221 (+)
G1699629 NA other upstream 542331 1082691 ~ 1086026 (+)
LOC110500915 LOC106576535 other downstream 36975 1607414 ~ 1669220 (+)
G1699934 NA other downstream 238913 1867694 ~ 1869554 (+)
LOC110519348 tbc1d15 other downstream 1010559 2588642 ~ 2667278 (+)
G1701265 NA other downstream 1215923 2844704 ~ 2849603 (+)

Expression


Co-expression Network