G1700818


Basic Information

Item Value
gene id G1700818
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 1636431 ~ 1637059 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1946414
tttatgtgctgtaaggtagtttagtagtttatgtgctgtacggtagtttagtagtttatgtgctgtacggtagtttagtagtttatgtactgtacggtagtttagtagtttatgtgctgtacggtggtttagtagtttatgtgctgtacggtagtttagtagtttatgtgctgtacagtagtttagtagtttatgtgctgtacggtggtttagtagtttatgtgctgtacggtagtttagtagtttatgtgctgtacagtagtttagtagtttatgtacCCATATGTACTGTACGGTGGTTTAGTAGTTTATGTACTGTACGGTGGTTTAGTAGTTTATGTACTGTAaggtagtttagtagtttatgtgctgtattgtagtttagtagtttatgtactgtaaggtagtttagtagtttatgtgctgtacagtagtttagtagtttatgtactgtacggtagtttagtagtttatgtgctgtacggtagtttagtagtttatgtgctgtacagtagtttagtagtttatgtactgtatggtagtttagtagtttatgtgctgtacgGTAGTTTAGT

Function

NR:

description
PREDICTED: paternally-expressed gene 3 protein-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1946414 True 575 lncRNA 0.35 2 1636431 1637059

Neighbor

gene id symbol gene type direction distance location
LOC110511332 LOC106576651 coding downstream 120247 1500431 ~ 1516184 (-)
LOC110499704 cpsf6 coding downstream 159914 1454566 ~ 1513068 (-)
LOC110499705 LOC106609801 coding downstream 182545 1448804 ~ 1453886 (-)
LOC118942825 frs2 coding downstream 190014 1363229 ~ 1446417 (-)
LOC110527029 LOC106592131 coding downstream 279400 1348599 ~ 1357031 (-)
ptprbl LOC106609809 coding upstream 226915 1863974 ~ 1985304 (-)
LOC118942826 NA coding upstream 348851 1985910 ~ 1990032 (-)
LOC110499711 ptprr coding upstream 354418 1991477 ~ 2085804 (-)
LOC110512520 LOC106609724 coding upstream 475983 2113042 ~ 2128710 (-)
LOC110499714 LOC106609803 coding upstream 491974 2129033 ~ 2138088 (-)
G1700800 NA non-coding downstream 42977 1593220 ~ 1593454 (-)
G1700778 NA non-coding downstream 97452 1537791 ~ 1538979 (-)
G1700766 NA non-coding downstream 131640 1504505 ~ 1504791 (-)
G1700760 NA non-coding downstream 144075 1491453 ~ 1492356 (-)
G1700702 NA non-coding downstream 149267 1486041 ~ 1487164 (-)
G1700820 NA non-coding upstream 1032 1638091 ~ 1733616 (-)
G1700827 NA non-coding upstream 28598 1665657 ~ 1668599 (-)
G1700829 NA non-coding upstream 44528 1681587 ~ 1682378 (-)
G1700830 NA non-coding upstream 51940 1688999 ~ 1717124 (-)
G1700844 LOC106599552 non-coding upstream 81707 1718766 ~ 1729289 (-)
LOC110511372 LOC106592130 other downstream 313068 1319221 ~ 1348497 (-)
G1700312 NA other downstream 1281922 352487 ~ 354509 (-)
G1701041 NA other upstream 551374 2188433 ~ 2189666 (-)
G1701824 NA other upstream 935615 2572603 ~ 2577051 (-)
G1701930 NA other upstream 1146883 2783942 ~ 2829582 (-)
G1702117 NA other upstream 1591943 3229002 ~ 3230041 (-)

Expression


Co-expression Network