Gene
RNA
| Item | Value |
|---|---|
| gene id | G1700852 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048585.1 |
| NCBI id | CM023239.2 |
| chromosome length | 64935962 |
| location | 1740284 ~ 1740998 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| CCR4-NOT transcription complex subunit 2-like, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1946459 | True | 297 | lncRNA | 0.54 | 3 | 1740284 | 1740998 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110511332 | LOC106576651 | coding | downstream | 224100 | 1500431 ~ 1516184 (-) |
| LOC110499704 | cpsf6 | coding | downstream | 263767 | 1454566 ~ 1513068 (-) |
| LOC110499705 | LOC106609801 | coding | downstream | 286398 | 1448804 ~ 1453886 (-) |
| LOC118942825 | frs2 | coding | downstream | 293867 | 1363229 ~ 1446417 (-) |
| LOC110527029 | LOC106592131 | coding | downstream | 383253 | 1348599 ~ 1357031 (-) |
| ptprbl | LOC106609809 | coding | upstream | 122976 | 1863974 ~ 1985304 (-) |
| LOC118942826 | NA | coding | upstream | 244912 | 1985910 ~ 1990032 (-) |
| LOC110499711 | ptprr | coding | upstream | 250479 | 1991477 ~ 2085804 (-) |
| LOC110512520 | LOC106609724 | coding | upstream | 372044 | 2113042 ~ 2128710 (-) |
| LOC110499714 | LOC106609803 | coding | upstream | 388035 | 2129033 ~ 2138088 (-) |
| G1700820 | NA | non-coding | downstream | 6668 | 1638091 ~ 1733616 (-) |
| G1700844 | LOC106599552 | non-coding | downstream | 10995 | 1718766 ~ 1729289 (-) |
| G1700850 | NA | non-coding | downstream | 12679 | 1727197 ~ 1727605 (-) |
| G1700830 | NA | non-coding | downstream | 23160 | 1688999 ~ 1717124 (-) |
| G1700829 | NA | non-coding | downstream | 57906 | 1681587 ~ 1682378 (-) |
| G1700857 | NA | non-coding | upstream | 6010 | 1747008 ~ 1747573 (-) |
| G1700859 | NA | non-coding | upstream | 12052 | 1753050 ~ 1753589 (-) |
| G1700861 | NA | non-coding | upstream | 15489 | 1756487 ~ 1756785 (-) |
| G1700864 | NA | non-coding | upstream | 28395 | 1769393 ~ 1769835 (-) |
| G1700889 | NA | non-coding | upstream | 88492 | 1829490 ~ 1830151 (-) |
| LOC110511372 | LOC106592130 | other | downstream | 416921 | 1319221 ~ 1348497 (-) |
| G1700312 | NA | other | downstream | 1385775 | 352487 ~ 354509 (-) |
| G1701041 | NA | other | upstream | 447435 | 2188433 ~ 2189666 (-) |
| G1701824 | NA | other | upstream | 831676 | 2572603 ~ 2577051 (-) |
| G1701930 | NA | other | upstream | 1042944 | 2783942 ~ 2829582 (-) |
| G1702117 | NA | other | upstream | 1488004 | 3229002 ~ 3230041 (-) |
