G1700857



Basic Information


Item Value
gene id G1700857
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 1747008 ~ 1747573 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU1946469
AGAGTCTAACTACGGCTGCAGCCTAAACTGCTCCTGGATCAGTTATTCCCAGGTCCTGTTGAGAGAGTTTCTAAATGTCCTAGAGACGACCAGACTTACTCTGGCGAGTTGAGGTTGAGTCCTAGTGTTGTCAGGTCACTGCCCAGTGCTAGGTGCACCATGCCAGGGTCCGTCTCCGCTGCCCTGATGAACGTTAACAAGCCAATCATCCCAAACTGGTCTGTTACCATGCCCCCGGGAATGTTCGTCACGCGacctggaggggaggaggagaggagagaccaatGAGGATGggacccttgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtttgagtgtgtgtttgtgtgtgtgtttgagtgtgtgtgtgtgtgtgagtttgagtgtgagtttgagtgtgtgtttgagtgtgtgtttgagtgtgtgtttgagtgtgtgtttgagtgtgtgtttgagtgtgtgtttgtgtgtgtgag

Function


NR:

description
PREDICTED: CCR4-NOT transcription complex subunit 2-like

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU1946469 True 480 lncRNA 0.50 2 1747008 1747573

Neighbor


gene id symbol gene type direction distance location
LOC110511332 LOC106576651 coding downstream 230824 1500431 ~ 1516184 (-)
LOC110499704 cpsf6 coding downstream 270491 1454566 ~ 1513068 (-)
LOC110499705 LOC106609801 coding downstream 293122 1448804 ~ 1453886 (-)
LOC118942825 frs2 coding downstream 300591 1363229 ~ 1446417 (-)
LOC110527029 LOC106592131 coding downstream 389977 1348599 ~ 1357031 (-)
ptprbl LOC106609809 coding upstream 116401 1863974 ~ 1985304 (-)
LOC118942826 NA coding upstream 238337 1985910 ~ 1990032 (-)
LOC110499711 ptprr coding upstream 243904 1991477 ~ 2085804 (-)
LOC110512520 LOC106609724 coding upstream 365469 2113042 ~ 2128710 (-)
LOC110499714 LOC106609803 coding upstream 381460 2129033 ~ 2138088 (-)
G1700852 NA non-coding downstream 6010 1740284 ~ 1740998 (-)
G1700820 NA non-coding downstream 13392 1638091 ~ 1733616 (-)
G1700844 LOC106599552 non-coding downstream 17719 1718766 ~ 1729289 (-)
G1700850 NA non-coding downstream 19403 1727197 ~ 1727605 (-)
G1700830 NA non-coding downstream 29884 1688999 ~ 1717124 (-)
G1700859 NA non-coding upstream 5477 1753050 ~ 1753589 (-)
G1700861 NA non-coding upstream 8914 1756487 ~ 1756785 (-)
G1700864 NA non-coding upstream 21820 1769393 ~ 1769835 (-)
G1700889 NA non-coding upstream 81917 1829490 ~ 1830151 (-)
G1700890 NA non-coding upstream 82628 1830201 ~ 1834165 (-)
LOC110511372 LOC106592130 other downstream 423645 1319221 ~ 1348497 (-)
G1700312 NA other downstream 1392499 352487 ~ 354509 (-)
G1701041 NA other upstream 440860 2188433 ~ 2189666 (-)
G1701824 NA other upstream 825101 2572603 ~ 2577051 (-)
G1701930 NA other upstream 1036369 2783942 ~ 2829582 (-)
G1702117 NA other upstream 1481429 3229002 ~ 3230041 (-)

Expression



Co-expression Network