G1699880


Basic Information

Item Value
gene id G1699880
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 1763963 ~ 1764456 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1945214
tatctgtaatacatttgaatatattttttttacctgtttttgctttgtcattatggggtattgtgatgtcattatggggtattgtgatgtcattatggggtattgtgatgtcattatggggtattgtgatgtcattatggtgtgtagattgatgaggaaaaaacaatgtaatccattttagaatgaggctgtaacataatgtggaaaagggaaggggtctgaatactttcccaatgcgttgtagtgttgttgtttttgtgtgtgtgtgtgt

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1945214 True 271 lncRNA 0.35 2 1763963 1764456

Neighbor

gene id symbol gene type direction distance location
LOC118942986 NA coding upstream 90670 1671059 ~ 1673293 (+)
LOC110500915 LOC106576535 coding upstream 94743 1607414 ~ 1669220 (+)
LOC110517600 rab3ip coding upstream 163881 1517362 ~ 1600082 (+)
LOC110499710 LOC106596118 coding upstream 263907 1489693 ~ 1500056 (+)
LOC118943024 NA coding upstream 279795 1484027 ~ 1484168 (+)
LOC110536528 kcnmb4 coding downstream 17427 1781883 ~ 1855471 (+)
LOC110499712 LOC106576627 coding downstream 329310 2093766 ~ 2102425 (+)
LOC118942829 LOC105023115 coding downstream 494260 2258716 ~ 2443078 (+)
LOC110490688 NA coding downstream 681150 2445606 ~ 2447635 (+)
LOC110499733 LOC106609838 coding downstream 744571 2509027 ~ 2531457 (+)
G1699877 NA non-coding upstream 1885 1760437 ~ 1762078 (+)
G1699872 NA non-coding upstream 24200 1739051 ~ 1739763 (+)
G1699863 NA non-coding upstream 49019 1712706 ~ 1714944 (+)
G1699856 NA non-coding upstream 81736 1681682 ~ 1682227 (+)
G1699852 NA non-coding upstream 84063 1673902 ~ 1679900 (+)
LOC110499743 cnot2 non-coding downstream 4936 1688942 ~ 1769720 (+)
G1699882 NA non-coding downstream 7598 1772054 ~ 1772566 (+)
G1699885 NA non-coding downstream 11342 1775798 ~ 1776572 (+)
G1699897 NA non-coding downstream 32883 1797339 ~ 1797781 (+)
G1699901 NA non-coding downstream 37342 1801798 ~ 1802894 (+)
G1699804 NA other upstream 225083 1537956 ~ 1538880 (+)
G1699724 LOC106592130 other upstream 420825 1342499 ~ 1343138 (+)
LOC110518351 LOC103459268 other upstream 459230 1156714 ~ 1305903 (+)
G1699655 NA other upstream 663742 1094149 ~ 1100221 (+)
G1699934 NA other downstream 103238 1867694 ~ 1869554 (+)
LOC110519348 tbc1d15 other downstream 874884 2588642 ~ 2667278 (+)
G1701265 NA other downstream 1080248 2844704 ~ 2849603 (+)
G1701596 NA other downstream 2009583 3774039 ~ 3776261 (+)
G1701654 NA other downstream 2168331 3932787 ~ 3936037 (+)

Expression


Co-expression Network