G1699901


Basic Information

Item Value
gene id G1699901
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 1801798 ~ 1802894 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1945241
tgttaTGTTACACGTTATGAAGCATTATGTCTAAGtagtccccagtctctctctctctgttatgtcACACGTTATAAGGCATTATGTCTAAGtagtccccagtctctctctctctctgttatgtcACACGTTATAAAGCATTATGTCTAAGtagtccccagtctctctctctctgttatgtcACACGTTATGAAGCATTATGTCTAAGtagtccccagtctctctctctgttatgtcACACGTTATAAAGCATTATGTCTAAGtagtccccagtctctctctctctgttatgtcACAGGTGATGAAGCATTATGTCTAAGTagtccccagtctctctcgctctctctctctctgttatgtcACACGTTATAAAGCACTATGTCACAGGTGATAAAGTGTTATGTCACACGTTATGAAGCATTATGTCTAAGTAGTCCTCACGATGTGCTTTTGGAACTCCTTCCTTATAGAACTTTAAAAGAcagagtatatatacagtgccttgcgaaagtattcggtccccttgaac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1945241 True 529 lncRNA 0.41 3 1801798 1802894

Neighbor

gene id symbol gene type direction distance location
LOC110499743 cnot2 coding upstream 32144 1688942 ~ 1769720 (+)
LOC118942986 NA coding upstream 128505 1671059 ~ 1673293 (+)
LOC110500915 LOC106576535 coding upstream 132578 1607414 ~ 1669220 (+)
LOC110517600 rab3ip coding upstream 201716 1517362 ~ 1600082 (+)
LOC110499710 LOC106596118 coding upstream 301742 1489693 ~ 1500056 (+)
LOC110499712 LOC106576627 coding downstream 290872 2093766 ~ 2102425 (+)
LOC118942829 LOC105023115 coding downstream 455822 2258716 ~ 2443078 (+)
LOC110490688 NA coding downstream 642712 2445606 ~ 2447635 (+)
LOC110499733 LOC106609838 coding downstream 706133 2509027 ~ 2531457 (+)
trnak-cuu-138 NA coding downstream 718358 2521252 ~ 2521324 (+)
G1699897 NA non-coding upstream 4017 1797339 ~ 1797781 (+)
G1699885 NA non-coding upstream 25226 1775798 ~ 1776572 (+)
G1699882 NA non-coding upstream 29232 1772054 ~ 1772566 (+)
G1699880 NA non-coding upstream 37342 1763963 ~ 1764456 (+)
G1699907 NA non-coding downstream 4981 1807875 ~ 1808193 (+)
G1699912 NA non-coding downstream 13141 1816035 ~ 1816417 (+)
G1699922 NA non-coding downstream 42608 1845502 ~ 1846128 (+)
LOC110536528 kcnmb4 non-coding downstream 50873 1781883 ~ 1855471 (+)
G1699933 NA non-coding downstream 61126 1864020 ~ 1867071 (+)
G1699804 NA other upstream 262918 1537956 ~ 1538880 (+)
G1699724 LOC106592130 other upstream 458660 1342499 ~ 1343138 (+)
LOC110518351 LOC103459268 other upstream 497065 1156714 ~ 1305903 (+)
G1699934 NA other downstream 64800 1867694 ~ 1869554 (+)
LOC110519348 tbc1d15 other downstream 836446 2588642 ~ 2667278 (+)
G1701265 NA other downstream 1041810 2844704 ~ 2849603 (+)
G1701596 NA other downstream 1971145 3774039 ~ 3776261 (+)
G1701654 NA other downstream 2129893 3932787 ~ 3936037 (+)

Expression


Co-expression Network