Gene
RNA
| Item | Value |
|---|---|
| gene id | G1699907 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048585.1 |
| NCBI id | CM023239.2 |
| chromosome length | 64935962 |
| location | 1807875 ~ 1808193 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1945249 | True | 225 | lncRNA | 0.49 | 2 | 1807875 | 1808193 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110499743 | cnot2 | coding | upstream | 38221 | 1688942 ~ 1769720 (+) |
| LOC118942986 | NA | coding | upstream | 134582 | 1671059 ~ 1673293 (+) |
| LOC110500915 | LOC106576535 | coding | upstream | 138655 | 1607414 ~ 1669220 (+) |
| LOC110517600 | rab3ip | coding | upstream | 207793 | 1517362 ~ 1600082 (+) |
| LOC110499710 | LOC106596118 | coding | upstream | 307819 | 1489693 ~ 1500056 (+) |
| LOC110499712 | LOC106576627 | coding | downstream | 285573 | 2093766 ~ 2102425 (+) |
| LOC118942829 | LOC105023115 | coding | downstream | 450523 | 2258716 ~ 2443078 (+) |
| LOC110490688 | NA | coding | downstream | 637413 | 2445606 ~ 2447635 (+) |
| LOC110499733 | LOC106609838 | coding | downstream | 700834 | 2509027 ~ 2531457 (+) |
| trnak-cuu-138 | NA | coding | downstream | 713059 | 2521252 ~ 2521324 (+) |
| G1699901 | NA | non-coding | upstream | 4981 | 1801798 ~ 1802894 (+) |
| G1699897 | NA | non-coding | upstream | 10094 | 1797339 ~ 1797781 (+) |
| G1699885 | NA | non-coding | upstream | 31303 | 1775798 ~ 1776572 (+) |
| G1699882 | NA | non-coding | upstream | 35309 | 1772054 ~ 1772566 (+) |
| G1699912 | NA | non-coding | downstream | 7842 | 1816035 ~ 1816417 (+) |
| G1699922 | NA | non-coding | downstream | 37309 | 1845502 ~ 1846128 (+) |
| LOC110536528 | kcnmb4 | non-coding | downstream | 45574 | 1781883 ~ 1855471 (+) |
| G1699933 | NA | non-coding | downstream | 55827 | 1864020 ~ 1867071 (+) |
| G1699937 | NA | non-coding | downstream | 65862 | 1874055 ~ 1874660 (+) |
| G1699804 | NA | other | upstream | 268995 | 1537956 ~ 1538880 (+) |
| G1699724 | LOC106592130 | other | upstream | 464737 | 1342499 ~ 1343138 (+) |
| LOC110518351 | LOC103459268 | other | upstream | 503142 | 1156714 ~ 1305903 (+) |
| G1699934 | NA | other | downstream | 59501 | 1867694 ~ 1869554 (+) |
| LOC110519348 | tbc1d15 | other | downstream | 831147 | 2588642 ~ 2667278 (+) |
| G1701265 | NA | other | downstream | 1036511 | 2844704 ~ 2849603 (+) |
| G1701596 | NA | other | downstream | 1965846 | 3774039 ~ 3776261 (+) |
| G1701654 | NA | other | downstream | 2124594 | 3932787 ~ 3936037 (+) |
