Gene
RNA
| Item | Value |
|---|---|
| gene id | G1699948 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048585.1 |
| NCBI id | CM023239.2 |
| chromosome length | 64935962 |
| location | 1895065 ~ 1896006 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1945308 | True | 400 | lncRNA | 0.48 | 2 | 1895065 | 1896006 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110536528 | kcnmb4 | coding | upstream | 39594 | 1781883 ~ 1855471 (+) |
| LOC110499743 | cnot2 | coding | upstream | 125411 | 1688942 ~ 1769720 (+) |
| LOC118942986 | NA | coding | upstream | 221772 | 1671059 ~ 1673293 (+) |
| LOC110500915 | LOC106576535 | coding | upstream | 225845 | 1607414 ~ 1669220 (+) |
| LOC110517600 | rab3ip | coding | upstream | 294983 | 1517362 ~ 1600082 (+) |
| LOC110499712 | LOC106576627 | coding | downstream | 197760 | 2093766 ~ 2102425 (+) |
| LOC118942829 | LOC105023115 | coding | downstream | 362710 | 2258716 ~ 2443078 (+) |
| LOC110490688 | NA | coding | downstream | 549600 | 2445606 ~ 2447635 (+) |
| LOC110499733 | LOC106609838 | coding | downstream | 613021 | 2509027 ~ 2531457 (+) |
| trnak-cuu-138 | NA | coding | downstream | 625246 | 2521252 ~ 2521324 (+) |
| G1699944 | NA | non-coding | upstream | 10742 | 1883920 ~ 1884323 (+) |
| G1699937 | NA | non-coding | upstream | 20405 | 1874055 ~ 1874660 (+) |
| G1699933 | NA | non-coding | upstream | 27994 | 1864020 ~ 1867071 (+) |
| G1699922 | NA | non-coding | upstream | 48937 | 1845502 ~ 1846128 (+) |
| G1699963 | NA | non-coding | downstream | 21056 | 1917062 ~ 1918379 (+) |
| G1699992 | NA | non-coding | downstream | 89904 | 1985910 ~ 1989639 (+) |
| G1699993 | ptprr | non-coding | downstream | 96093 | 1992099 ~ 1997188 (+) |
| G1700008 | NA | non-coding | downstream | 128352 | 2024358 ~ 2035346 (+) |
| G1700019 | NA | non-coding | downstream | 147545 | 2043551 ~ 2044218 (+) |
| G1699934 | NA | other | upstream | 25511 | 1867694 ~ 1869554 (+) |
| G1699804 | NA | other | upstream | 356185 | 1537956 ~ 1538880 (+) |
| G1699724 | LOC106592130 | other | upstream | 551927 | 1342499 ~ 1343138 (+) |
| LOC110519348 | tbc1d15 | other | downstream | 743334 | 2588642 ~ 2667278 (+) |
| G1701265 | NA | other | downstream | 948698 | 2844704 ~ 2849603 (+) |
| G1701596 | NA | other | downstream | 1878033 | 3774039 ~ 3776261 (+) |
| G1701654 | NA | other | downstream | 2036781 | 3932787 ~ 3936037 (+) |
| LOC110516816 | LOC107655592 | other | downstream | 2488050 | 4384016 ~ 4441236 (+) |
