Gene
RNA
| Item | Value |
|---|---|
| gene id | G1700929 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048585.1 |
| NCBI id | CM023239.2 |
| chromosome length | 64935962 |
| location | 1915519 ~ 1916593 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1946557 | True | 548 | lncRNA | 0.39 | 2 | 1915519 | 1916593 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110511332 | LOC106576651 | coding | downstream | 399335 | 1500431 ~ 1516184 (-) |
| LOC110499704 | cpsf6 | coding | downstream | 439002 | 1454566 ~ 1513068 (-) |
| LOC110499705 | LOC106609801 | coding | downstream | 461633 | 1448804 ~ 1453886 (-) |
| LOC118942825 | frs2 | coding | downstream | 469102 | 1363229 ~ 1446417 (-) |
| LOC110527029 | LOC106592131 | coding | downstream | 558488 | 1348599 ~ 1357031 (-) |
| LOC118942826 | NA | coding | upstream | 69317 | 1985910 ~ 1990032 (-) |
| LOC110499711 | ptprr | coding | upstream | 74884 | 1991477 ~ 2085804 (-) |
| LOC110512520 | LOC106609724 | coding | upstream | 196449 | 2113042 ~ 2128710 (-) |
| LOC110499714 | LOC106609803 | coding | upstream | 212440 | 2129033 ~ 2138088 (-) |
| LOC118942827 | NA | coding | upstream | 227402 | 2143995 ~ 2149711 (-) |
| G1700901 | NA | non-coding | downstream | 60238 | 1852003 ~ 1855281 (-) |
| G1700890 | NA | non-coding | downstream | 81354 | 1830201 ~ 1834165 (-) |
| G1700889 | NA | non-coding | downstream | 85368 | 1829490 ~ 1830151 (-) |
| G1700864 | NA | non-coding | downstream | 145684 | 1769393 ~ 1769835 (-) |
| G1700861 | NA | non-coding | downstream | 158734 | 1756487 ~ 1756785 (-) |
| G1700931 | NA | non-coding | upstream | 2923 | 1919516 ~ 1920401 (-) |
| G1700943 | NA | non-coding | upstream | 45056 | 1961649 ~ 1962396 (-) |
| G1700945 | NA | non-coding | upstream | 57695 | 1974288 ~ 1975136 (-) |
| G1700961 | NA | non-coding | upstream | 97590 | 2014183 ~ 2014625 (-) |
| LOC110511372 | LOC106592130 | other | downstream | 592156 | 1319221 ~ 1348497 (-) |
| G1700312 | NA | other | downstream | 1561010 | 352487 ~ 354509 (-) |
| G1701041 | NA | other | upstream | 271840 | 2188433 ~ 2189666 (-) |
| G1701824 | NA | other | upstream | 656081 | 2572603 ~ 2577051 (-) |
| G1701930 | NA | other | upstream | 867349 | 2783942 ~ 2829582 (-) |
| G1702117 | NA | other | upstream | 1312409 | 3229002 ~ 3230041 (-) |
