Gene
RNA
| Item | Value |
|---|---|
| gene id | G1700945 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048585.1 |
| NCBI id | CM023239.2 |
| chromosome length | 64935962 |
| location | 1974288 ~ 1975136 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1946578 | True | 273 | lncRNA | 0.45 | 2 | 1974288 | 1975136 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110511332 | LOC106576651 | coding | downstream | 458104 | 1500431 ~ 1516184 (-) |
| LOC110499704 | cpsf6 | coding | downstream | 497771 | 1454566 ~ 1513068 (-) |
| LOC110499705 | LOC106609801 | coding | downstream | 520402 | 1448804 ~ 1453886 (-) |
| LOC118942825 | frs2 | coding | downstream | 527871 | 1363229 ~ 1446417 (-) |
| LOC110527029 | LOC106592131 | coding | downstream | 617257 | 1348599 ~ 1357031 (-) |
| LOC118942826 | NA | coding | upstream | 10774 | 1985910 ~ 1990032 (-) |
| LOC110499711 | ptprr | coding | upstream | 16341 | 1991477 ~ 2085804 (-) |
| LOC110512520 | LOC106609724 | coding | upstream | 137906 | 2113042 ~ 2128710 (-) |
| LOC110499714 | LOC106609803 | coding | upstream | 153897 | 2129033 ~ 2138088 (-) |
| LOC118942827 | NA | coding | upstream | 168859 | 2143995 ~ 2149711 (-) |
| G1700943 | NA | non-coding | downstream | 11892 | 1961649 ~ 1962396 (-) |
| G1700931 | NA | non-coding | downstream | 53887 | 1919516 ~ 1920401 (-) |
| G1700929 | NA | non-coding | downstream | 57695 | 1915519 ~ 1916593 (-) |
| G1700901 | NA | non-coding | downstream | 119007 | 1852003 ~ 1855281 (-) |
| G1700890 | NA | non-coding | downstream | 140123 | 1830201 ~ 1834165 (-) |
| G1700961 | NA | non-coding | upstream | 39047 | 2014183 ~ 2014625 (-) |
| G1700963 | NA | non-coding | upstream | 46063 | 2021199 ~ 2021605 (-) |
| G1700964 | NA | non-coding | upstream | 59490 | 2034626 ~ 2035579 (-) |
| G1700971 | NA | non-coding | upstream | 68431 | 2043567 ~ 2044691 (-) |
| LOC110511372 | LOC106592130 | other | downstream | 650925 | 1319221 ~ 1348497 (-) |
| G1700312 | NA | other | downstream | 1619779 | 352487 ~ 354509 (-) |
| G1701041 | NA | other | upstream | 213297 | 2188433 ~ 2189666 (-) |
| G1701824 | NA | other | upstream | 597538 | 2572603 ~ 2577051 (-) |
| G1701930 | NA | other | upstream | 808806 | 2783942 ~ 2829582 (-) |
| G1702117 | NA | other | upstream | 1253866 | 3229002 ~ 3230041 (-) |
